Model info
| Transcription factor | Esrra | ||||||||
| Model | ERR1_MOUSE.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 9 | ||||||||
| Quality | A | ||||||||
| Consensus | hMRAGGKCA | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 2051 | ||||||||
| TF family | Steroid hormone receptors (NR3){2.1.1} | ||||||||
| TF subfamily | ER-like receptors (NR3A&B){2.1.1.2} | ||||||||
| MGI | 1346831 | ||||||||
| EntrezGene | 26379 | ||||||||
| UniProt ID | ERR1_MOUSE | ||||||||
| UniProt AC | O08580 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 267.559 | 691.577 | 205.449 | 883.415 |
| 02 | 448.675 | 1180.946 | 349.622 | 68.758 |
| 03 | 1568.676 | 72.217 | 295.972 | 111.135 |
| 04 | 1923.373 | 27.877 | 62.783 | 33.967 |
| 05 | 39.884 | 5.559 | 1955.378 | 47.179 |
| 06 | 14.815 | 12.867 | 1997.22 | 23.098 |
| 07 | 188.955 | 83.024 | 229.637 | 1546.384 |
| 08 | 28.342 | 1800.434 | 137.626 | 81.598 |
| 09 | 1905.573 | 20.773 | 78.387 | 43.268 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.646 | 0.3 | -0.908 | 0.544 |
| 02 | -0.132 | 0.834 | -0.38 | -1.984 |
| 03 | 1.117 | -1.936 | -0.545 | -1.514 |
| 04 | 1.321 | -2.848 | -2.072 | -2.662 |
| 05 | -2.509 | -4.232 | 1.337 | -2.348 |
| 06 | -3.425 | -3.549 | 1.358 | -3.023 |
| 07 | -0.99 | -1.8 | -0.797 | 1.103 |
| 08 | -2.833 | 1.255 | -1.304 | -1.817 |
| 09 | 1.311 | -3.121 | -1.856 | -2.432 |