Model info
| Transcription factor | ESRRA | ||||||||
| Model | ERR1_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 14 | ||||||||
| Quality | D | ||||||||
| Consensus | dbbSMAGGbCAbvb | ||||||||
| wAUC | 0.7487920672912713 | ||||||||
| Best AUC | 0.7487920672912715 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Steroid hormone receptors (NR3){2.1.1} | ||||||||
| TF subfamily | ER-like receptors (NR3A&B){2.1.1.2} | ||||||||
| HGNC | 3471 | ||||||||
| EntrezGene | 2101 | ||||||||
| UniProt ID | ERR1_HUMAN | ||||||||
| UniProt AC | P11474 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 74.911 | 67.838 | 284.721 | 72.529 |
| 02 | 63.448 | 156.485 | 213.62 | 66.446 |
| 03 | 25.851 | 265.904 | 107.542 | 100.703 |
| 04 | 57.503 | 358.312 | 79.665 | 4.52 |
| 05 | 364.039 | 77.036 | 56.14 | 2.784 |
| 06 | 410.135 | 4.112 | 81.889 | 3.865 |
| 07 | 11.899 | 0.903 | 480.625 | 6.573 |
| 08 | 2.743 | 10.259 | 482.814 | 4.185 |
| 09 | 35.055 | 76.545 | 105.125 | 283.274 |
| 10 | 1.869 | 471.074 | 19.325 | 7.731 |
| 11 | 406.084 | 22.972 | 62.311 | 8.633 |
| 12 | 34.496 | 241.268 | 184.217 | 40.02 |
| 13 | 204.111 | 115.156 | 119.966 | 60.768 |
| 14 | 41.808 | 144.652 | 263.46 | 50.08 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.504 | -0.601 | 0.816 | -0.535 |
| 02 | -0.666 | 0.222 | 0.531 | -0.621 |
| 03 | -1.53 | 0.748 | -0.148 | -0.213 |
| 04 | -0.762 | 1.045 | -0.444 | -3.037 |
| 05 | 1.061 | -0.476 | -0.786 | -3.373 |
| 06 | 1.18 | -3.106 | -0.417 | -3.151 |
| 07 | -2.241 | -3.942 | 1.338 | -2.746 |
| 08 | -3.383 | -2.372 | 1.342 | -3.093 |
| 09 | -1.24 | -0.483 | -0.171 | 0.811 |
| 10 | -3.61 | 1.318 | -1.802 | -2.612 |
| 11 | 1.17 | -1.641 | -0.684 | -2.52 |
| 12 | -1.256 | 0.652 | 0.384 | -1.113 |
| 13 | 0.486 | -0.081 | -0.041 | -0.708 |
| 14 | -1.071 | 0.144 | 0.739 | -0.896 |