Model info
| Transcription factor | Epas1 | ||||||||
| Model | EPAS1_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 13 | ||||||||
| Quality | D | ||||||||
| Consensus | GKGnGTASGTSKG | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 13 | ||||||||
| TF family | PAS domain factors{1.2.5} | ||||||||
| TF subfamily | Ahr-like factors{1.2.5.1} | ||||||||
| MGI | 109169 | ||||||||
| EntrezGene | 13819 | ||||||||
| UniProt ID | EPAS1_MOUSE | ||||||||
| UniProt AC | P97481 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.0 | 1.118 | 9.317 | 1.565 |
| 02 | 1.565 | 0.0 | 2.571 | 7.864 |
| 03 | 2.124 | 0.0 | 9.876 | 0.0 |
| 04 | 3.627 | 3.739 | 1.453 | 3.18 |
| 05 | 4.298 | 0.0 | 7.702 | 0.0 |
| 06 | 0.0 | 2.012 | 1.118 | 8.87 |
| 07 | 6.919 | 0.0 | 5.081 | 0.0 |
| 08 | 0.0 | 7.814 | 3.627 | 0.559 |
| 09 | 0.0 | 0.0 | 12.0 | 0.0 |
| 10 | 1.565 | 0.0 | 0.0 | 10.435 |
| 11 | 0.0 | 2.46 | 8.423 | 1.118 |
| 12 | 0.559 | 1.789 | 6.025 | 3.627 |
| 13 | 0.0 | 1.453 | 10.547 | 0.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.763 | -0.733 | 1.01 | -0.505 |
| 02 | -0.505 | -1.763 | -0.126 | 0.851 |
| 03 | -0.277 | -1.763 | 1.064 | -1.763 |
| 04 | 0.16 | 0.186 | -0.557 | 0.049 |
| 05 | 0.306 | -1.763 | 0.832 | -1.763 |
| 06 | -1.763 | -0.318 | -0.733 | 0.964 |
| 07 | 0.733 | -1.763 | 0.454 | -1.763 |
| 08 | -1.763 | 0.846 | 0.16 | -1.121 |
| 09 | -1.763 | -1.763 | 1.249 | -1.763 |
| 10 | -0.505 | -1.763 | -1.763 | 1.116 |
| 11 | -1.763 | -0.162 | 0.915 | -0.733 |
| 12 | -1.121 | -0.407 | 0.607 | 0.16 |
| 13 | -1.763 | -0.557 | 1.126 | -1.763 |