Model info
| Transcription factor | Elk4 | ||||||||
| Model | ELK4_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 11 | ||||||||
| Quality | B | ||||||||
| Consensus | vWCCGGAAGYv | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 54 | ||||||||
| TF family | Ets-related factors{3.5.2} | ||||||||
| TF subfamily | Elk-like factors{3.5.2.2} | ||||||||
| MGI | 102853 | ||||||||
| EntrezGene | 13714 | ||||||||
| UniProt ID | ELK4_MOUSE | ||||||||
| UniProt AC | P41158 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 16.955 | 18.436 | 12.031 | 6.578 |
| 02 | 41.719 | 2.726 | 4.395 | 5.159 |
| 03 | 1.058 | 52.413 | 0.529 | 0.0 |
| 04 | 4.02 | 49.98 | 0.0 | 0.0 |
| 05 | 0.529 | 0.0 | 51.99 | 1.481 |
| 06 | 2.433 | 0.0 | 51.038 | 0.529 |
| 07 | 54.0 | 0.0 | 0.0 | 0.0 |
| 08 | 40.132 | 0.0 | 0.0 | 13.868 |
| 09 | 11.329 | 2.198 | 40.474 | 0.0 |
| 10 | 3.255 | 14.666 | 0.0 | 36.078 |
| 11 | 17.777 | 16.344 | 16.532 | 3.347 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.214 | 0.293 | -0.107 | -0.649 |
| 02 | 1.081 | -1.359 | -0.989 | -0.856 |
| 03 | -1.954 | 1.304 | -2.251 | -2.677 |
| 04 | -1.061 | 1.257 | -2.677 | -2.677 |
| 05 | -2.251 | -2.677 | 1.296 | -1.766 |
| 06 | -1.441 | -2.677 | 1.278 | -2.251 |
| 07 | 1.333 | -2.677 | -2.677 | -2.677 |
| 08 | 1.043 | -2.677 | -2.677 | 0.025 |
| 09 | -0.162 | -1.512 | 1.051 | -2.677 |
| 10 | -1.226 | 0.077 | -2.677 | 0.939 |
| 11 | 0.259 | 0.179 | 0.19 | -1.205 |