Model info
| Transcription factor | Elk1 | ||||||||
| Model | ELK1_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 9 | ||||||||
| Quality | B | ||||||||
| Consensus | vMMGGAARY | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 160 | ||||||||
| TF family | Ets-related factors{3.5.2} | ||||||||
| TF subfamily | Elk-like factors{3.5.2.2} | ||||||||
| MGI | 101833 | ||||||||
| EntrezGene | 13712 | ||||||||
| UniProt ID | ELK1_MOUSE | ||||||||
| UniProt AC | P41969 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 67.623 | 22.358 | 50.301 | 19.718 |
| 02 | 27.121 | 112.857 | 15.519 | 4.503 |
| 03 | 32.645 | 112.348 | 11.229 | 3.778 |
| 04 | 3.261 | 0.0 | 147.064 | 9.675 |
| 05 | 2.121 | 0.0 | 153.483 | 4.396 |
| 06 | 152.808 | 1.448 | 0.0 | 5.744 |
| 07 | 134.542 | 0.0 | 1.862 | 23.596 |
| 08 | 42.022 | 15.005 | 99.815 | 3.158 |
| 09 | 10.125 | 35.692 | 21.362 | 92.82 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.512 | -0.558 | 0.223 | -0.676 |
| 02 | -0.374 | 1.017 | -0.899 | -1.967 |
| 03 | -0.196 | 1.013 | -1.195 | -2.101 |
| 04 | -2.209 | -3.482 | 1.279 | -1.327 |
| 05 | -2.499 | -3.482 | 1.322 | -1.986 |
| 06 | 1.317 | -2.721 | -3.482 | -1.772 |
| 07 | 1.191 | -3.482 | -2.579 | -0.507 |
| 08 | 0.048 | -0.931 | 0.896 | -2.232 |
| 09 | -1.287 | -0.11 | -0.601 | 0.824 |