Model info
Transcription factorELK1
ModelELK1_HUMAN.H10MO.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length9
Quality
A
ConsensusvMMGGAARY
wAUC
0.8906094679476417
Best AUC
0.9330646144973405
Benchmark datasets2
Aligned words160
TF familyEts-related factors{3.5.2}
TF subfamilyElk-like factors{3.5.2.2}
HGNC3321
EntrezGene2002
UniProt IDELK1_HUMAN
UniProt ACP19419
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.0541
0.0005 5.7782
0.0001 7.2538
PCM
ACGT
0167.62322.35850.30119.718
0227.121112.85715.5194.503
0332.645112.34811.2293.778
043.2610.0147.0649.675
052.1210.0153.4834.396
06152.8081.4480.05.744
07134.5420.01.86223.596
0842.02215.00599.8153.158
0910.12535.69221.36292.82
PWM
ACGT
010.512-0.5580.223-0.676
02-0.3741.017-0.899-1.967
03-0.1961.013-1.195-2.101
04-2.209-3.4821.279-1.327
05-2.499-3.4821.322-1.986
061.317-2.721-3.482-1.772
071.191-3.482-2.579-0.507
080.048-0.9310.896-2.232
09-1.287-0.11-0.6010.824