Model info
| Transcription factor | Elf5 | ||||||||
| Model | ELF5_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Consensus | WhvMGGAARYd | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 39 | ||||||||
| TF family | Ets-related factors{3.5.2} | ||||||||
| TF subfamily | EHF-like factors{3.5.2.4} | ||||||||
| MGI | 1335079 | ||||||||
| EntrezGene | 13711 | ||||||||
| UniProt ID | ELF5_MOUSE | ||||||||
| UniProt AC | Q8VDK3 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 25.0 | 1.0 | 2.0 | 11.0 |
| 02 | 12.0 | 9.0 | 3.0 | 15.0 |
| 03 | 19.0 | 11.0 | 7.0 | 2.0 |
| 04 | 24.0 | 11.0 | 3.0 | 1.0 |
| 05 | 0.0 | 0.0 | 39.0 | 0.0 |
| 06 | 0.0 | 0.0 | 39.0 | 0.0 |
| 07 | 39.0 | 0.0 | 0.0 | 0.0 |
| 08 | 26.0 | 0.0 | 0.0 | 13.0 |
| 09 | 16.0 | 4.0 | 19.0 | 0.0 |
| 10 | 3.0 | 7.0 | 1.0 | 28.0 |
| 11 | 19.0 | 3.0 | 6.0 | 11.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.888 | -1.717 | -1.297 | 0.111 |
| 02 | 0.191 | -0.073 | -1.002 | 0.4 |
| 03 | 0.624 | 0.111 | -0.298 | -1.297 |
| 04 | 0.848 | 0.111 | -1.002 | -1.717 |
| 05 | -2.455 | -2.455 | 1.32 | -2.455 |
| 06 | -2.455 | -2.455 | 1.32 | -2.455 |
| 07 | 1.32 | -2.455 | -2.455 | -2.455 |
| 08 | 0.926 | -2.455 | -2.455 | 0.266 |
| 09 | 0.461 | -0.775 | 0.624 | -2.455 |
| 10 | -1.002 | -0.298 | -1.717 | 0.997 |
| 11 | 0.624 | -1.002 | -0.433 | 0.111 |