Model info
| Transcription factor | Elf2 | ||||||||
| Model | ELF2_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 15 | ||||||||
| Quality | C | ||||||||
| Consensus | YRnCAGGAAGbGnnK | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 9 | ||||||||
| TF family | Ets-related factors{3.5.2} | ||||||||
| TF subfamily | Elf-1-like factors{3.5.2.3} | ||||||||
| MGI | 1916507 | ||||||||
| EntrezGene | 69257 | ||||||||
| UniProt ID | ELF2_MOUSE | ||||||||
| UniProt AC | Q9JHC9 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.25 | 2.25 | 1.25 | 5.25 |
| 02 | 4.0 | 0.0 | 3.0 | 2.0 |
| 03 | 2.0 | 2.0 | 3.0 | 2.0 |
| 04 | 0.0 | 7.0 | 2.0 | 0.0 |
| 05 | 7.0 | 1.0 | 1.0 | 0.0 |
| 06 | 0.0 | 0.0 | 9.0 | 0.0 |
| 07 | 0.0 | 0.0 | 9.0 | 0.0 |
| 08 | 9.0 | 0.0 | 0.0 | 0.0 |
| 09 | 9.0 | 0.0 | 0.0 | 0.0 |
| 10 | 1.0 | 0.0 | 8.0 | 0.0 |
| 11 | 0.0 | 2.0 | 2.0 | 5.0 |
| 12 | 4.0 | 0.0 | 5.0 | 0.0 |
| 13 | 4.0 | 1.0 | 3.0 | 1.0 |
| 14 | 2.0 | 3.0 | 3.0 | 1.0 |
| 15 | 1.0 | 1.0 | 2.0 | 5.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.253 | 0.0 | -0.442 | 0.728 |
| 02 | 0.486 | -1.628 | 0.237 | -0.094 |
| 03 | -0.094 | -0.094 | 0.237 | -0.094 |
| 04 | -1.628 | 0.992 | -0.094 | -1.628 |
| 05 | 0.992 | -0.592 | -0.592 | -1.628 |
| 06 | -1.628 | -1.628 | 1.227 | -1.628 |
| 07 | -1.628 | -1.628 | 1.227 | -1.628 |
| 08 | 1.227 | -1.628 | -1.628 | -1.628 |
| 09 | 1.227 | -1.628 | -1.628 | -1.628 |
| 10 | -0.592 | -1.628 | 1.116 | -1.628 |
| 11 | -1.628 | -0.094 | -0.094 | 0.684 |
| 12 | 0.486 | -1.628 | 0.684 | -1.628 |
| 13 | 0.486 | -0.592 | 0.237 | -0.592 |
| 14 | -0.094 | 0.237 | 0.237 | -0.592 |
| 15 | -0.592 | -0.592 | -0.094 | 0.684 |