Transcription factor | EGR4 | ||||||||
Model | EGR4_HUMAN.H10MO.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 11 | ||||||||
Quality | D | ||||||||
Consensus | GGSGGYAGGGM | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 6 | ||||||||
TF family | Three-zinc finger Krüppel-related factors{2.3.1} | ||||||||
TF subfamily | EGR factors{2.3.1.3} | ||||||||
HGNC | 3241 | ||||||||
EntrezGene | 1961 | ||||||||
UniProt ID | EGR4_HUMAN | ||||||||
UniProt AC | Q05215 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 0.126 | 0.126 | 5.623 | 0.126 |
02 | 0.0 | 0.0 | 6.0 | 0.0 |
03 | 0.0 | 3.082 | 2.012 | 0.906 |
04 | 0.0 | 0.0 | 6.0 | 0.0 |
05 | 0.0 | 0.0 | 6.0 | 0.0 |
06 | 0.0 | 3.585 | 0.503 | 1.912 |
07 | 3.485 | 0.0 | 2.515 | 0.0 |
08 | 0.0 | 0.0 | 5.094 | 0.906 |
09 | 0.0 | 0.503 | 5.497 | 0.0 |
10 | 0.0 | 0.0 | 6.0 | 0.0 |
11 | 1.61 | 3.183 | 0.604 | 0.604 |
A | C | G | T | |
---|---|---|---|---|
01 | -1.222 | -1.222 | 1.137 | -1.222 |
02 | -1.47 | -1.47 | 1.197 | -1.47 |
03 | -1.47 | 0.595 | 0.233 | -0.364 |
04 | -1.47 | -1.47 | 1.197 | -1.47 |
05 | -1.47 | -1.47 | 1.197 | -1.47 |
06 | -1.47 | 0.728 | -0.717 | 0.192 |
07 | 0.703 | -1.47 | 0.42 | -1.47 |
08 | -1.47 | -1.47 | 1.046 | -0.364 |
09 | -1.47 | -0.717 | 1.116 | -1.47 |
10 | -1.47 | -1.47 | 1.197 | -1.47 |
11 | 0.055 | 0.623 | -0.616 | -0.616 |