Model info
| Transcription factor | EGR3 | ||||||||
| Model | EGR3_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Consensus | WRMGTGGGTGb | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 8 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors{2.3.1} | ||||||||
| TF subfamily | EGR factors{2.3.1.3} | ||||||||
| HGNC | 3240 | ||||||||
| EntrezGene | 1960 | ||||||||
| UniProt ID | EGR3_HUMAN | ||||||||
| UniProt AC | Q06889 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 4.551 | 0.145 | 0.145 | 3.159 |
| 02 | 2.087 | 0.0 | 4.754 | 1.159 |
| 03 | 5.101 | 1.739 | 0.0 | 1.159 |
| 04 | 0.928 | 0.0 | 7.072 | 0.0 |
| 05 | 0.0 | 0.29 | 1.449 | 6.261 |
| 06 | 0.0 | 0.0 | 8.0 | 0.0 |
| 07 | 0.0 | 0.0 | 7.072 | 0.928 |
| 08 | 0.0 | 0.0 | 8.0 | 0.0 |
| 09 | 0.0 | 3.826 | 0.0 | 4.174 |
| 10 | 0.0 | 0.0 | 7.072 | 0.928 |
| 11 | 0.145 | 1.304 | 1.304 | 5.246 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.699 | -1.332 | -1.332 | 0.379 |
| 02 | 0.034 | -1.578 | 0.738 | -0.406 |
| 03 | 0.802 | -0.109 | -1.578 | -0.406 |
| 04 | -0.554 | -1.578 | 1.103 | -1.578 |
| 05 | -1.578 | -1.135 | -0.247 | 0.99 |
| 06 | -1.578 | -1.578 | 1.218 | -1.578 |
| 07 | -1.578 | -1.578 | 1.103 | -0.554 |
| 08 | -1.578 | -1.578 | 1.218 | -1.578 |
| 09 | -1.578 | 0.545 | -1.578 | 0.622 |
| 10 | -1.578 | -1.578 | 1.103 | -0.554 |
| 11 | -1.332 | -0.323 | -0.323 | 0.828 |