Model info
Transcription factorE2f4
ModelE2F4_MOUSE.H10MO.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginChIP-Seq
Model length12
Quality
C
ConsensusvddGGCGGGRRv
wAUC
0.7434912563099131
Best AUC
0.77619074877172
Benchmark datasets4
Aligned words500
TF familyE2F-related factors{3.3.2}
TF subfamilyE2F{3.3.2.1}
MGI103012
EntrezGene104394
UniProt IDE2F4_MOUSE
UniProt ACQ8R0K9
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.5871
0.0005 5.4781
0.0001 7.2921
PCM
ACGT
0184.38981.312260.00474.296
02152.84160.747173.804112.608
0396.44540.935231.195131.425
0438.3843.264413.7874.568
052.7978.774481.876.558
0642.646435.0452.82119.488
078.5281.893467.36822.211
088.00452.908435.6343.454
099.12816.514470.7693.589
10375.62542.10676.8015.467
11297.10169.107108.53225.261
12190.94397.972150.54360.542
PWM
ACGT
01-0.387-0.4230.726-0.512
020.199-0.7090.326-0.103
03-0.256-1.0910.6090.05
04-1.153-1.0381.188-3.029
05-3.37-2.5061.34-2.747
06-1.0521.238-3.365-1.794
07-2.53-3.6031.31-1.672
08-2.583-0.8431.24-3.23
09-2.472-1.9471.317-3.203
101.092-1.064-0.479-2.892
110.859-0.583-0.139-1.552
120.419-0.240.184-0.712