Model info
| Transcription factor | E2f4 | ||||||||
| Model | E2F4_MOUSE.H10DI.C | ||||||||
| Model type | Dinucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 22 | ||||||||
| Quality | C | ||||||||
| Consensus | vvvvddGGCGGGRvnnbvvvvn | ||||||||
| wAUC | 0.7542100464699116 | ||||||||
| Best AUC | 0.7924096002243018 | ||||||||
| Benchmark datasets | 4 | ||||||||
| Aligned words | 499 | ||||||||
| TF family | E2F-related factors{3.3.2} | ||||||||
| TF subfamily | E2F{3.3.2.1} | ||||||||
| MGI | 103012 | ||||||||
| EntrezGene | 104394 | ||||||||
| UniProt ID | E2F4_MOUSE | ||||||||
| UniProt AC | Q8R0K9 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | 24.653 | 20.525 | 63.8 | 7.0 | 37.465 | 23.003 | 37.546 | 17.782 | 54.607 | 46.449 | 72.287 | 25.451 | 6.747 | 21.651 | 30.985 | 8.329 |
| 02 | 30.3 | 30.022 | 57.346 | 5.805 | 29.885 | 23.69 | 35.556 | 22.497 | 58.796 | 50.422 | 78.567 | 16.831 | 13.109 | 4.904 | 33.331 | 7.217 |
| 03 | 30.188 | 10.607 | 79.523 | 11.773 | 14.264 | 26.583 | 42.44 | 25.752 | 41.738 | 49.004 | 100.603 | 13.455 | 3.359 | 8.258 | 28.992 | 11.742 |
| 04 | 36.539 | 4.904 | 37.046 | 11.06 | 19.419 | 15.673 | 25.044 | 34.315 | 92.265 | 25.768 | 94.092 | 39.433 | 12.436 | 6.57 | 19.268 | 24.448 |
| 05 | 45.214 | 6.322 | 89.1 | 20.023 | 10.677 | 7.981 | 17.416 | 16.84 | 34.989 | 21.562 | 96.269 | 22.63 | 5.212 | 6.769 | 54.031 | 43.245 |
| 06 | 0.0 | 2.827 | 89.464 | 3.8 | 1.607 | 3.135 | 34.098 | 3.794 | 12.98 | 34.36 | 205.716 | 3.761 | 1.698 | 3.353 | 95.662 | 2.025 |
| 07 | 0.0 | 0.0 | 15.455 | 0.83 | 0.0 | 8.686 | 34.016 | 0.973 | 2.824 | 2.718 | 414.418 | 4.979 | 0.0 | 0.973 | 12.406 | 0.0 |
| 08 | 0.0 | 2.824 | 0.0 | 0.0 | 2.738 | 7.501 | 1.227 | 0.912 | 50.136 | 404.278 | 6.306 | 15.574 | 3.319 | 1.754 | 0.0 | 1.709 |
| 09 | 0.839 | 1.769 | 52.694 | 0.891 | 21.993 | 2.923 | 388.792 | 2.65 | 2.647 | 0.0 | 4.887 | 0.0 | 2.696 | 0.0 | 15.498 | 0.0 |
| 10 | 0.0 | 0.0 | 28.175 | 0.0 | 1.691 | 0.0 | 2.14 | 0.861 | 0.0 | 14.895 | 445.137 | 1.839 | 0.0 | 0.0 | 3.542 | 0.0 |
| 11 | 0.0 | 0.0 | 1.691 | 0.0 | 0.987 | 4.569 | 8.495 | 0.844 | 12.057 | 20.428 | 442.948 | 3.561 | 0.978 | 0.0 | 1.722 | 0.0 |
| 12 | 7.489 | 1.985 | 3.718 | 0.83 | 17.0 | 2.83 | 4.302 | 0.865 | 302.528 | 48.899 | 92.664 | 10.765 | 1.065 | 1.692 | 0.848 | 0.8 |
| 13 | 182.451 | 34.08 | 100.84 | 10.712 | 18.945 | 9.984 | 10.154 | 16.322 | 24.441 | 47.55 | 21.363 | 8.177 | 3.558 | 4.488 | 0.877 | 4.338 |
| 14 | 94.614 | 37.8 | 78.776 | 18.205 | 11.737 | 34.104 | 24.468 | 25.792 | 47.166 | 29.604 | 45.034 | 11.43 | 1.057 | 8.821 | 10.295 | 19.376 |
| 15 | 51.402 | 20.555 | 51.88 | 30.737 | 16.715 | 23.923 | 34.026 | 35.667 | 43.26 | 37.887 | 49.026 | 28.4 | 12.286 | 15.663 | 26.785 | 20.069 |
| 16 | 26.311 | 24.12 | 59.215 | 14.017 | 16.157 | 24.277 | 31.372 | 26.22 | 29.952 | 39.456 | 71.184 | 21.124 | 4.399 | 19.943 | 40.567 | 49.964 |
| 17 | 12.046 | 14.67 | 40.942 | 9.162 | 17.595 | 27.692 | 45.149 | 17.36 | 43.648 | 42.227 | 99.079 | 17.384 | 7.791 | 30.797 | 37.51 | 35.228 |
| 18 | 22.487 | 11.894 | 35.33 | 11.369 | 24.952 | 43.238 | 30.141 | 17.054 | 68.926 | 71.014 | 66.235 | 16.506 | 13.903 | 16.034 | 36.374 | 12.822 |
| 19 | 31.14 | 13.86 | 63.33 | 21.936 | 26.09 | 40.926 | 42.505 | 32.66 | 44.046 | 41.01 | 62.405 | 20.618 | 7.868 | 9.921 | 31.185 | 8.778 |
| 20 | 33.272 | 12.371 | 58.597 | 4.905 | 21.408 | 17.903 | 52.382 | 14.025 | 38.282 | 55.257 | 93.417 | 12.469 | 1.339 | 21.972 | 46.737 | 13.943 |
| 21 | 23.341 | 18.314 | 37.594 | 15.053 | 15.284 | 28.088 | 35.354 | 28.776 | 55.614 | 54.143 | 104.852 | 36.525 | 10.201 | 16.031 | 9.412 | 9.699 |
PWM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | -0.23 | -0.411 | 0.711 | -1.451 | 0.183 | -0.299 | 0.185 | -0.551 | 0.556 | 0.396 | 0.835 | -0.199 | -1.486 | -0.358 | -0.005 | -1.286 |
| 02 | -0.027 | -0.036 | 0.605 | -1.628 | -0.041 | -0.27 | 0.131 | -0.32 | 0.63 | 0.477 | 0.918 | -0.605 | -0.848 | -1.785 | 0.067 | -1.422 |
| 03 | -0.031 | -1.054 | 0.93 | -0.953 | -0.766 | -0.156 | 0.306 | -0.187 | 0.29 | 0.449 | 1.164 | -0.823 | -2.13 | -1.294 | -0.071 | -0.955 |
| 04 | 0.158 | -1.785 | 0.172 | -1.013 | -0.465 | -0.675 | -0.215 | 0.096 | 1.078 | -0.187 | 1.097 | 0.233 | -0.9 | -1.511 | -0.473 | -0.239 |
| 05 | 0.369 | -1.547 | 1.043 | -0.435 | -1.047 | -1.326 | -0.572 | -0.604 | 0.115 | -0.362 | 1.12 | -0.315 | -1.728 | -1.483 | 0.546 | 0.325 |
| 06 | -4.397 | -2.283 | 1.047 | -2.019 | -2.76 | -2.192 | 0.09 | -2.02 | -0.858 | 0.097 | 1.877 | -2.028 | -2.716 | -2.131 | 1.114 | -2.57 |
| 07 | -4.397 | -4.397 | -0.688 | -3.254 | -4.397 | -1.246 | 0.087 | -3.142 | -2.284 | -2.317 | 2.577 | -1.771 | -4.397 | -3.142 | -0.902 | -4.397 |
| 08 | -4.397 | -2.284 | -4.397 | -4.397 | -2.311 | -1.385 | -2.972 | -3.189 | 0.471 | 2.552 | -1.55 | -0.681 | -2.141 | -2.689 | -4.397 | -2.711 |
| 09 | -3.246 | -2.682 | 0.521 | -3.205 | -0.343 | -2.254 | 2.513 | -2.34 | -2.341 | -4.397 | -1.788 | -4.397 | -2.325 | -4.397 | -0.685 | -4.397 |
| 10 | -4.397 | -4.397 | -0.099 | -4.397 | -2.719 | -4.397 | -2.523 | -3.229 | -4.397 | -0.724 | 2.648 | -2.65 | -4.397 | -4.397 | -2.082 | -4.397 |
| 11 | -4.397 | -4.397 | -2.719 | -4.397 | -3.132 | -1.85 | -1.267 | -3.242 | -0.93 | -0.415 | 2.643 | -2.077 | -3.139 | -4.397 | -2.704 | -4.397 |
| 12 | -1.387 | -2.587 | -2.038 | -3.254 | -0.595 | -2.282 | -1.906 | -3.225 | 2.262 | 0.447 | 1.082 | -1.039 | -3.077 | -2.719 | -3.239 | -3.279 |
| 13 | 1.758 | 0.089 | 1.166 | -1.044 | -0.489 | -1.112 | -1.096 | -0.635 | -0.239 | 0.419 | -0.371 | -1.303 | -2.078 | -1.867 | -3.216 | -1.898 |
| 14 | 1.103 | 0.192 | 0.921 | -0.528 | -0.956 | 0.09 | -0.238 | -0.186 | 0.411 | -0.05 | 0.365 | -0.981 | -3.083 | -1.231 | -1.082 | -0.467 |
| 15 | 0.496 | -0.409 | 0.505 | -0.013 | -0.612 | -0.26 | 0.087 | 0.134 | 0.325 | 0.194 | 0.449 | -0.091 | -0.911 | -0.675 | -0.149 | -0.433 |
| 16 | -0.166 | -0.252 | 0.637 | -0.783 | -0.645 | -0.246 | 0.007 | -0.17 | -0.038 | 0.234 | 0.82 | -0.382 | -1.885 | -0.439 | 0.262 | 0.468 |
| 17 | -0.931 | -0.739 | 0.271 | -1.194 | -0.562 | -0.116 | 0.368 | -0.575 | 0.334 | 0.301 | 1.149 | -0.573 | -1.349 | -0.011 | 0.184 | 0.122 |
| 18 | -0.321 | -0.943 | 0.125 | -0.986 | -0.219 | 0.325 | -0.032 | -0.592 | 0.788 | 0.817 | 0.748 | -0.624 | -0.791 | -0.652 | 0.154 | -0.87 |
| 19 | -0.0 | -0.794 | 0.704 | -0.345 | -0.175 | 0.27 | 0.308 | 0.047 | 0.343 | 0.272 | 0.689 | -0.406 | -1.34 | -1.118 | 0.001 | -1.235 |
| 20 | 0.065 | -0.905 | 0.626 | -1.785 | -0.369 | -0.545 | 0.515 | -0.783 | 0.204 | 0.568 | 1.09 | -0.897 | -2.904 | -0.344 | 0.402 | -0.789 |
| 21 | -0.284 | -0.522 | 0.186 | -0.714 | -0.699 | -0.102 | 0.125 | -0.078 | 0.574 | 0.548 | 1.205 | 0.158 | -1.091 | -0.653 | -1.169 | -1.14 |