Model info
| Transcription factor | E2F4 | ||||||||
| Model | E2F4_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Consensus | nnddSGCGSGAARn | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 2076 | ||||||||
| TF family | E2F-related factors{3.3.2} | ||||||||
| TF subfamily | E2F{3.3.2.1} | ||||||||
| HGNC | 3118 | ||||||||
| EntrezGene | 1874 | ||||||||
| UniProt ID | E2F4_HUMAN | ||||||||
| UniProt AC | Q16254 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 693.887 | 378.993 | 437.945 | 564.175 |
| 02 | 647.399 | 291.381 | 503.915 | 632.306 |
| 03 | 594.618 | 195.955 | 431.84 | 852.586 |
| 04 | 354.576 | 146.365 | 600.15 | 973.909 |
| 05 | 105.067 | 390.215 | 1560.942 | 18.775 |
| 06 | 79.407 | 28.27 | 1938.229 | 29.094 |
| 07 | 83.357 | 1922.589 | 10.468 | 58.586 |
| 08 | 27.947 | 21.885 | 1893.082 | 132.085 |
| 09 | 16.081 | 702.695 | 1346.43 | 9.794 |
| 10 | 49.141 | 160.55 | 1839.253 | 26.056 |
| 11 | 1900.974 | 51.775 | 91.703 | 30.547 |
| 12 | 1734.932 | 21.354 | 295.262 | 23.452 |
| 13 | 1314.961 | 141.387 | 376.876 | 241.775 |
| 14 | 643.826 | 407.645 | 543.176 | 480.354 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.29 | -0.313 | -0.169 | 0.084 |
| 02 | 0.221 | -0.574 | -0.029 | 0.197 |
| 03 | 0.136 | -0.968 | -0.183 | 0.495 |
| 04 | -0.379 | -1.256 | 0.145 | 0.628 |
| 05 | -1.582 | -0.284 | 1.099 | -3.226 |
| 06 | -1.857 | -2.848 | 1.315 | -2.821 |
| 07 | -1.809 | 1.307 | -3.739 | -2.153 |
| 08 | -2.859 | -3.086 | 1.292 | -1.357 |
| 09 | -3.365 | 0.303 | 0.952 | -3.795 |
| 10 | -2.322 | -1.165 | 1.263 | -2.924 |
| 11 | 1.296 | -2.272 | -1.716 | -2.775 |
| 12 | 1.205 | -3.108 | -0.561 | -3.022 |
| 13 | 0.928 | -1.29 | -0.318 | -0.759 |
| 14 | 0.215 | -0.24 | 0.046 | -0.077 |