Model info
| Transcription factor | E2f1 | ||||||||
| Model | E2F1_MOUSE.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Consensus | ndndGGCGSSRRRn | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 2136 | ||||||||
| TF family | E2F-related factors{3.3.2} | ||||||||
| TF subfamily | E2F{3.3.2.1} | ||||||||
| MGI | 101941 | ||||||||
| EntrezGene | 13555 | ||||||||
| UniProt ID | E2F1_MOUSE | ||||||||
| UniProt AC | Q61501 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 808.802 | 342.834 | 503.592 | 479.772 |
| 02 | 732.47 | 210.48 | 701.85 | 490.199 |
| 03 | 650.474 | 349.478 | 452.38 | 682.668 |
| 04 | 529.865 | 155.328 | 549.412 | 900.395 |
| 05 | 199.015 | 143.742 | 1770.261 | 21.981 |
| 06 | 19.722 | 113.811 | 1986.192 | 15.276 |
| 07 | 146.396 | 1927.586 | 33.203 | 27.814 |
| 08 | 109.663 | 19.754 | 1898.695 | 106.887 |
| 09 | 103.429 | 790.411 | 1210.34 | 30.82 |
| 10 | 148.786 | 302.706 | 1652.77 | 30.738 |
| 11 | 1666.67 | 150.068 | 288.724 | 29.538 |
| 12 | 1522.055 | 82.818 | 459.513 | 70.614 |
| 13 | 1284.8 | 183.173 | 561.142 | 105.885 |
| 14 | 679.358 | 473.731 | 675.99 | 305.921 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.414 | -0.441 | -0.058 | -0.106 |
| 02 | 0.316 | -0.925 | 0.273 | -0.085 |
| 03 | 0.197 | -0.422 | -0.165 | 0.245 |
| 04 | -0.007 | -1.226 | 0.029 | 0.521 |
| 05 | -0.981 | -1.302 | 1.196 | -3.11 |
| 06 | -3.209 | -1.532 | 1.311 | -3.439 |
| 07 | -1.284 | 1.282 | -2.725 | -2.891 |
| 08 | -1.569 | -3.208 | 1.266 | -1.594 |
| 09 | -1.626 | 0.391 | 0.817 | -2.795 |
| 10 | -1.268 | -0.564 | 1.128 | -2.798 |
| 11 | 1.136 | -1.26 | -0.611 | -2.835 |
| 12 | 1.046 | -1.844 | -0.149 | -2.0 |
| 13 | 0.876 | -1.063 | 0.05 | -1.603 |
| 14 | 0.24 | -0.119 | 0.235 | -0.554 |