Model info
| Transcription factor | DRGX | ||||||||
| Model | DRGX_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Consensus | TAATYTAATTA | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 10544 | ||||||||
| TF family | Paired-related HD factors{3.1.3} | ||||||||
| TF subfamily | DRGX{3.1.3.6} | ||||||||
| HGNC | 21536 | ||||||||
| EntrezGene | 644168 | ||||||||
| UniProt ID | DRGX_HUMAN | ||||||||
| UniProt AC | A6NNA5 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 581.75 | 108.75 | 30.75 | 9809.75 |
| 02 | 9902.5 | 22.5 | 394.5 | 211.5 |
| 03 | 10498.25 | 11.25 | 12.25 | 9.25 |
| 04 | 129.25 | 1107.25 | 107.25 | 9187.25 |
| 05 | 110.25 | 3313.25 | 964.25 | 6143.25 |
| 06 | 0.25 | 3373.25 | 0.25 | 7157.25 |
| 07 | 8713.0 | 113.0 | 1667.0 | 38.0 |
| 08 | 10504.75 | 6.75 | 11.75 | 7.75 |
| 09 | 2.0 | 3.0 | 3.0 | 10523.0 |
| 10 | 324.25 | 95.25 | 3.25 | 10108.25 |
| 11 | 9996.5 | 12.5 | 108.5 | 413.5 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.507 | -3.167 | -4.378 | 1.315 |
| 02 | 1.324 | -4.665 | -1.893 | -2.512 |
| 03 | 1.383 | -5.269 | -5.198 | -5.429 |
| 04 | -2.997 | -0.865 | -3.18 | 1.249 |
| 05 | -3.153 | 0.23 | -1.003 | 0.847 |
| 06 | -6.935 | 0.248 | -6.935 | 1.0 |
| 07 | 1.196 | -3.129 | -0.456 | -4.18 |
| 08 | 1.383 | -5.672 | -5.233 | -5.568 |
| 09 | -6.414 | -6.206 | -6.206 | 1.385 |
| 10 | -2.088 | -3.296 | -6.16 | 1.345 |
| 11 | 1.334 | -5.181 | -3.169 | -1.846 |