Model info
| Transcription factor | DPRX | ||||||||
| Model | DPRX_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Consensus | nvGGATTAdSn | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 46619 | ||||||||
| TF family | Paired-related HD factors{3.1.3} | ||||||||
| TF subfamily | DPRX{3.1.3.5} | ||||||||
| HGNC | 32166 | ||||||||
| EntrezGene | 503834 | ||||||||
| UniProt ID | DPRX_HUMAN | ||||||||
| UniProt AC | A6NFQ7 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 14960.5 | 11481.5 | 13571.5 | 6547.5 |
| 02 | 7103.75 | 21006.75 | 13733.75 | 4716.75 |
| 03 | 3119.25 | 809.25 | 42027.25 | 605.25 |
| 04 | 290.0 | 240.0 | 45628.0 | 403.0 |
| 05 | 46495.5 | 18.5 | 30.5 | 16.5 |
| 06 | 5.25 | 7.25 | 2.25 | 46546.25 |
| 07 | 6.0 | 58.0 | 75.0 | 46422.0 |
| 08 | 46142.75 | 129.75 | 147.75 | 140.75 |
| 09 | 13923.5 | 664.5 | 13319.5 | 18653.5 |
| 10 | 2257.25 | 29757.25 | 9024.25 | 5522.25 |
| 11 | 7007.25 | 17200.25 | 12237.25 | 10116.25 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.251 | -0.014 | 0.153 | -0.575 |
| 02 | -0.494 | 0.59 | 0.165 | -0.903 |
| 03 | -1.316 | -2.663 | 1.284 | -2.952 |
| 04 | -3.683 | -3.871 | 1.366 | -3.357 |
| 05 | 1.385 | -6.309 | -5.86 | -6.408 |
| 06 | -7.291 | -7.066 | -7.766 | 1.386 |
| 07 | -7.201 | -5.257 | -5.01 | 1.383 |
| 08 | 1.377 | -4.476 | -4.349 | -4.397 |
| 09 | 0.179 | -2.859 | 0.135 | 0.471 |
| 10 | -1.639 | 0.938 | -0.254 | -0.745 |
| 11 | -0.507 | 0.39 | 0.05 | -0.14 |