Model info
| Transcription factor | DMBX1 | ||||||||
| Model | DMBX1_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 20 | ||||||||
| Quality | D | ||||||||
| Consensus | hhvhWWWWWbYYRATTAvnn | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 29 | ||||||||
| TF family | Paired-related HD factors{3.1.3} | ||||||||
| TF subfamily | DMBX{3.1.3.4} | ||||||||
| HGNC | 19026 | ||||||||
| EntrezGene | 127343 | ||||||||
| UniProt ID | DMBX1_HUMAN | ||||||||
| UniProt AC | Q8NFW5 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 5.0 | 8.0 | 4.0 | 12.0 |
| 02 | 12.25 | 8.25 | 3.25 | 5.25 |
| 03 | 12.5 | 8.5 | 4.5 | 3.5 |
| 04 | 6.0 | 4.0 | 3.0 | 16.0 |
| 05 | 12.0 | 1.0 | 1.0 | 15.0 |
| 06 | 15.0 | 1.0 | 1.0 | 12.0 |
| 07 | 9.0 | 3.0 | 1.0 | 16.0 |
| 08 | 16.0 | 5.0 | 1.0 | 7.0 |
| 09 | 17.0 | 3.0 | 1.0 | 8.0 |
| 10 | 4.0 | 9.0 | 5.0 | 11.0 |
| 11 | 3.0 | 18.0 | 1.0 | 7.0 |
| 12 | 0.0 | 13.0 | 2.0 | 14.0 |
| 13 | 22.0 | 1.0 | 4.0 | 2.0 |
| 14 | 26.0 | 1.0 | 2.0 | 0.0 |
| 15 | 0.0 | 1.0 | 0.0 | 28.0 |
| 16 | 0.0 | 0.0 | 0.0 | 29.0 |
| 17 | 29.0 | 0.0 | 0.0 | 0.0 |
| 18 | 18.0 | 4.0 | 4.0 | 3.0 |
| 19 | 2.75 | 6.75 | 9.75 | 9.75 |
| 20 | 7.0 | 3.0 | 7.0 | 12.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.326 | 0.089 | -0.514 | 0.462 |
| 02 | 0.481 | 0.117 | -0.682 | -0.284 |
| 03 | 0.5 | 0.144 | -0.415 | -0.623 |
| 04 | -0.168 | -0.514 | -0.745 | 0.733 |
| 05 | 0.462 | -1.48 | -1.48 | 0.672 |
| 06 | 0.672 | -1.48 | -1.48 | 0.462 |
| 07 | 0.196 | -0.745 | -1.48 | 0.733 |
| 08 | 0.733 | -0.326 | -1.48 | -0.031 |
| 09 | 0.791 | -0.745 | -1.48 | 0.089 |
| 10 | -0.514 | 0.196 | -0.326 | 0.381 |
| 11 | -0.745 | 0.845 | -1.48 | -0.031 |
| 12 | -2.263 | 0.537 | -1.046 | 0.607 |
| 13 | 1.038 | -1.48 | -0.514 | -1.046 |
| 14 | 1.199 | -1.48 | -1.046 | -2.263 |
| 15 | -2.263 | -1.48 | -2.263 | 1.271 |
| 16 | -2.263 | -2.263 | -2.263 | 1.305 |
| 17 | 1.305 | -2.263 | -2.263 | -2.263 |
| 18 | 0.845 | -0.514 | -0.514 | -0.745 |
| 19 | -0.812 | -0.064 | 0.269 | 0.269 |
| 20 | -0.031 | -0.745 | -0.031 | 0.462 |