Transcription factor | Cux1 | ||||||||
Model | CUX1_MOUSE.H10MO.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 14 | ||||||||
Quality | C | ||||||||
Consensus | vbRvndATYRRTbb | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 97 | ||||||||
TF family | HD-CUT factors{3.1.9} | ||||||||
TF subfamily | CUX{3.1.9.2} | ||||||||
MGI | 88568 | ||||||||
EntrezGene | 13047 | ||||||||
UniProt ID | CUX1_MOUSE | ||||||||
UniProt AC | P53564 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 45.548 | 13.733 | 31.128 | 6.638 |
02 | 12.131 | 19.569 | 36.507 | 28.839 |
03 | 30.327 | 13.504 | 50.011 | 3.204 |
04 | 19.255 | 23.604 | 43.974 | 10.214 |
05 | 15.249 | 27.723 | 31.042 | 23.031 |
06 | 26.322 | 7.095 | 34.104 | 29.526 |
07 | 91.896 | 1.03 | 3.09 | 1.03 |
08 | 1.03 | 2.289 | 0.0 | 93.728 |
09 | 0.0 | 65.518 | 4.12 | 27.409 |
10 | 13.046 | 4.12 | 73.7 | 6.18 |
11 | 66.834 | 0.0 | 26.093 | 4.12 |
12 | 1.144 | 2.174 | 0.0 | 93.728 |
13 | 6.866 | 25.177 | 49.21 | 15.793 |
14 | 12.417 | 17.796 | 37.823 | 29.011 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.609 | -0.535 | 0.239 | -1.183 |
02 | -0.649 | -0.204 | 0.393 | 0.166 |
03 | 0.214 | -0.551 | 0.7 | -1.765 |
04 | -0.219 | -0.026 | 0.574 | -0.805 |
05 | -0.438 | 0.128 | 0.237 | -0.05 |
06 | 0.078 | -1.126 | 0.327 | 0.188 |
07 | 1.298 | -2.458 | -1.792 | -2.458 |
08 | -2.458 | -2.002 | -3.101 | 1.318 |
09 | -3.101 | 0.965 | -1.574 | 0.117 |
10 | -0.582 | -1.574 | 1.08 | -1.244 |
11 | 0.984 | -3.101 | 0.07 | -1.574 |
12 | -2.407 | -2.036 | -3.101 | 1.318 |
13 | -1.154 | 0.035 | 0.684 | -0.405 |
14 | -0.628 | -0.294 | 0.428 | 0.171 |