Model info
| Transcription factor | CTCFL | ||||||||
| Model | CTCFL_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 19 | ||||||||
| Quality | A | ||||||||
| Consensus | bbdCCRShAGRKGGCRSbv | ||||||||
| wAUC | 0.9071909878712259 | ||||||||
| Best AUC | 0.9320661018707429 | ||||||||
| Benchmark datasets | 3 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | CTCF-like factors{2.3.3.50} | ||||||||
| HGNC | 16234 | ||||||||
| EntrezGene | 140690 | ||||||||
| UniProt ID | CTCFL_HUMAN | ||||||||
| UniProt AC | Q8NI51 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 50.167 | 178.351 | 60.83 | 210.652 |
| 02 | 80.793 | 106.785 | 203.89 | 108.533 |
| 03 | 150.602 | 50.123 | 217.846 | 81.428 |
| 04 | 35.713 | 413.552 | 24.645 | 26.091 |
| 05 | 5.758 | 483.532 | 5.833 | 4.877 |
| 06 | 393.283 | 11.453 | 54.216 | 41.048 |
| 07 | 11.844 | 309.787 | 168.138 | 10.231 |
| 08 | 60.745 | 247.21 | 27.628 | 164.416 |
| 09 | 456.913 | 5.403 | 23.777 | 13.907 |
| 10 | 5.69 | 3.932 | 488.341 | 2.037 |
| 11 | 187.743 | 5.139 | 301.267 | 5.852 |
| 12 | 10.906 | 10.728 | 302.97 | 175.396 |
| 13 | 13.627 | 0.904 | 481.639 | 3.829 |
| 14 | 11.956 | 8.064 | 439.587 | 40.394 |
| 15 | 48.278 | 409.591 | 18.561 | 23.57 |
| 16 | 211.804 | 12.45 | 261.062 | 14.684 |
| 17 | 42.598 | 266.447 | 162.573 | 28.381 |
| 18 | 60.686 | 174.174 | 61.155 | 203.985 |
| 19 | 172.135 | 129.654 | 158.508 | 39.703 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.895 | 0.352 | -0.707 | 0.517 |
| 02 | -0.43 | -0.155 | 0.485 | -0.139 |
| 03 | 0.184 | -0.896 | 0.55 | -0.422 |
| 04 | -1.223 | 1.188 | -1.575 | -1.521 |
| 05 | -2.851 | 1.344 | -2.841 | -2.98 |
| 06 | 1.138 | -2.275 | -0.819 | -1.089 |
| 07 | -2.246 | 0.9 | 0.293 | -2.374 |
| 08 | -0.709 | 0.676 | -1.467 | 0.271 |
| 09 | 1.287 | -2.901 | -1.609 | -2.102 |
| 10 | -2.861 | -3.138 | 1.354 | -3.562 |
| 11 | 0.403 | -2.94 | 0.872 | -2.838 |
| 12 | -2.318 | -2.333 | 0.878 | 0.335 |
| 13 | -2.121 | -3.941 | 1.34 | -3.157 |
| 14 | -2.237 | -2.577 | 1.249 | -1.104 |
| 15 | -0.932 | 1.178 | -1.839 | -1.617 |
| 16 | 0.522 | -2.201 | 0.73 | -2.053 |
| 17 | -1.053 | 0.75 | 0.26 | -1.442 |
| 18 | -0.71 | 0.328 | -0.702 | 0.485 |
| 19 | 0.317 | 0.036 | 0.235 | -1.121 |