Model info
Transcription factorCrx
ModelCRX_MOUSE.H10MO.S
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length8
Quality
S
ConsensusvdGATTAd
wAUC
0.8188379527525089
Best AUC
0.8201527275822534
Benchmark datasets2
Aligned words53
TF familyPaired-related HD factors{3.1.3}
TF subfamilyOTX{3.1.3.17}
MGI1194883
EntrezGene12951
UniProt IDCRX_MOUSE
UniProt ACO54751
CommentSecondary motif.
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.1571
0.0005 5.8371
0.0001 7.0795
PCM
ACGT
0112.8413.05320.7255.381
0214.1720.95924.72112.148
036.0741.06643.7951.066
0438.57411.2950.02.131
052.1310.00.049.869
062.1311.0660.048.803
0749.8691.0661.0660.0
0820.3792.79722.835.994
PWM
ACGT
01-0.0110.0040.44-0.787
020.08-1.9720.609-0.063
03-0.684-1.9191.164-1.919
041.04-0.13-2.65-1.501
05-1.501-2.65-2.651.291
06-1.501-1.919-2.651.27
071.291-1.919-1.919-2.65
080.424-1.3070.532-0.695