Model info
| Transcription factor | CREB3 | ||||||||
| Model | CREB3_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 13 | ||||||||
| Quality | D | ||||||||
| Consensus | bnRTGACGTGKMd | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 95 | ||||||||
| TF family | CREB-related factors{1.1.7} | ||||||||
| TF subfamily | CREB-3-like factors{1.1.7.2} | ||||||||
| HGNC | 2347 | ||||||||
| EntrezGene | 10488 | ||||||||
| UniProt ID | CREB3_HUMAN | ||||||||
| UniProt AC | O43889 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 10.75 | 18.75 | 22.75 | 40.75 |
| 02 | 13.25 | 12.25 | 54.25 | 13.25 |
| 03 | 45.25 | 0.25 | 47.25 | 0.25 |
| 04 | 1.0 | 0.0 | 0.0 | 92.0 |
| 05 | 0.0 | 1.0 | 92.0 | 0.0 |
| 06 | 93.0 | 0.0 | 0.0 | 0.0 |
| 07 | 0.0 | 93.0 | 0.0 | 0.0 |
| 08 | 0.0 | 0.0 | 93.0 | 0.0 |
| 09 | 0.0 | 0.0 | 0.0 | 93.0 |
| 10 | 1.75 | 8.75 | 81.75 | 0.75 |
| 11 | 8.75 | 0.75 | 67.75 | 15.75 |
| 12 | 21.25 | 64.25 | 1.25 | 6.25 |
| 13 | 48.0 | 12.0 | 19.0 | 14.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.719 | -0.204 | -0.021 | 0.541 |
| 02 | -0.528 | -0.6 | 0.82 | -0.528 |
| 03 | 0.643 | -2.87 | 0.685 | -2.87 |
| 04 | -2.436 | -3.069 | -3.069 | 1.34 |
| 05 | -3.069 | -2.436 | 1.34 | -3.069 |
| 06 | 1.351 | -3.069 | -3.069 | -3.069 |
| 07 | -3.069 | 1.351 | -3.069 | -3.069 |
| 08 | -3.069 | -3.069 | 1.351 | -3.069 |
| 09 | -3.069 | -3.069 | -3.069 | 1.351 |
| 10 | -2.135 | -0.903 | 1.224 | -2.561 |
| 11 | -0.903 | -2.561 | 1.039 | -0.368 |
| 12 | -0.086 | 0.986 | -2.325 | -1.195 |
| 13 | 0.701 | -0.619 | -0.192 | -0.477 |