Model info
| Transcription factor | CREB1 | ||||||||
| Model | CREB1_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Consensus | YbRCGTCAYhn | ||||||||
| wAUC | 0.8647059165614548 | ||||||||
| Best AUC | 0.8850166435660459 | ||||||||
| Benchmark datasets | 8 | ||||||||
| Aligned words | 496 | ||||||||
| TF family | CREB-related factors{1.1.7} | ||||||||
| TF subfamily | CREB-like factors{1.1.7.1} | ||||||||
| HGNC | 2345 | ||||||||
| EntrezGene | 1385 | ||||||||
| UniProt ID | CREB1_HUMAN | ||||||||
| UniProt AC | P16220 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 52.444 | 74.148 | 31.016 | 336.204 |
| 02 | 43.774 | 44.858 | 253.722 | 151.458 |
| 03 | 322.126 | 4.347 | 119.709 | 47.63 |
| 04 | 18.612 | 388.894 | 16.133 | 70.173 |
| 05 | 33.393 | 23.554 | 431.793 | 5.072 |
| 06 | 1.832 | 9.113 | 0.776 | 482.092 |
| 07 | 1.083 | 488.004 | 0.0 | 4.725 |
| 08 | 466.421 | 8.011 | 5.377 | 14.003 |
| 09 | 10.511 | 235.091 | 36.039 | 212.171 |
| 10 | 103.571 | 217.16 | 57.004 | 116.076 |
| 11 | 151.389 | 107.199 | 145.859 | 89.366 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.839 | -0.502 | -1.345 | 0.994 |
| 02 | -1.014 | -0.991 | 0.714 | 0.202 |
| 03 | 0.951 | -3.054 | -0.03 | -0.933 |
| 04 | -1.825 | 1.139 | -1.956 | -0.556 |
| 05 | -1.275 | -1.605 | 1.243 | -2.938 |
| 06 | -3.61 | -2.462 | -3.984 | 1.353 |
| 07 | -3.86 | 1.365 | -4.39 | -2.992 |
| 08 | 1.32 | -2.571 | -2.893 | -2.084 |
| 09 | -2.338 | 0.638 | -1.202 | 0.536 |
| 10 | -0.173 | 0.559 | -0.758 | -0.061 |
| 11 | 0.202 | -0.139 | 0.165 | -0.318 |