Model info
| Transcription factor | CREB1 | ||||||||
| Model | CREB1_HUMAN.H10DI.A | ||||||||
| Model type | Dinucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 23 | ||||||||
| Quality | A | ||||||||
| Consensus | nYbRCRTCAYhnnnvnvvvvvdn | ||||||||
| wAUC | 0.8649449619639548 | ||||||||
| Best AUC | 0.8977319828190561 | ||||||||
| Benchmark datasets | 8 | ||||||||
| Aligned words | 508 | ||||||||
| TF family | CREB-related factors{1.1.7} | ||||||||
| TF subfamily | CREB-like factors{1.1.7.1} | ||||||||
| HGNC | 2345 | ||||||||
| EntrezGene | 1385 | ||||||||
| UniProt ID | CREB1_HUMAN | ||||||||
| UniProt AC | P16220 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | 14.945 | 10.008 | 4.442 | 85.132 | 11.073 | 25.108 | 11.522 | 78.767 | 21.712 | 38.559 | 9.922 | 98.144 | 9.162 | 15.279 | 12.899 | 53.326 |
| 02 | 11.317 | 6.824 | 27.531 | 11.22 | 20.859 | 17.25 | 10.873 | 39.972 | 1.161 | 8.333 | 9.826 | 19.465 | 14.544 | 21.177 | 213.451 | 66.196 |
| 03 | 30.537 | 1.094 | 11.99 | 4.261 | 35.691 | 2.906 | 11.203 | 3.784 | 214.167 | 8.229 | 15.301 | 23.984 | 56.127 | 10.199 | 60.15 | 10.378 |
| 04 | 8.696 | 289.342 | 23.382 | 15.103 | 0.0 | 15.499 | 1.094 | 5.835 | 0.776 | 91.685 | 2.673 | 3.509 | 2.269 | 36.677 | 3.46 | 0.0 |
| 05 | 3.325 | 2.552 | 5.864 | 0.0 | 78.899 | 20.899 | 329.813 | 3.592 | 6.594 | 2.358 | 21.657 | 0.0 | 0.849 | 1.552 | 22.046 | 0.0 |
| 06 | 0.0 | 2.38 | 0.821 | 86.467 | 0.0 | 0.0 | 0.0 | 27.36 | 5.816 | 23.902 | 1.971 | 347.69 | 0.0 | 1.104 | 0.0 | 2.488 |
| 07 | 0.0 | 5.816 | 0.0 | 0.0 | 0.0 | 26.44 | 0.947 | 0.0 | 1.104 | 1.688 | 0.0 | 0.0 | 5.806 | 453.939 | 0.788 | 3.472 |
| 08 | 6.111 | 0.0 | 0.799 | 0.0 | 462.166 | 4.368 | 14.555 | 6.793 | 0.0 | 0.788 | 0.947 | 0.0 | 3.472 | 0.0 | 0.0 | 0.0 |
| 09 | 11.187 | 203.232 | 64.053 | 193.279 | 0.0 | 0.0 | 1.09 | 4.066 | 0.0 | 6.247 | 4.712 | 5.343 | 0.0 | 1.881 | 1.072 | 3.841 |
| 10 | 2.524 | 2.054 | 2.046 | 4.563 | 69.028 | 62.967 | 24.396 | 54.968 | 23.07 | 32.717 | 7.527 | 7.612 | 29.516 | 102.737 | 21.233 | 53.042 |
| 11 | 32.984 | 33.587 | 48.483 | 9.084 | 76.776 | 35.81 | 58.03 | 29.859 | 9.577 | 9.471 | 26.897 | 9.257 | 24.71 | 15.714 | 39.397 | 40.363 |
| 12 | 38.056 | 31.649 | 52.908 | 21.435 | 26.591 | 32.083 | 9.469 | 26.439 | 30.518 | 50.443 | 64.354 | 27.492 | 9.592 | 36.832 | 19.024 | 23.115 |
| 13 | 31.386 | 25.011 | 35.614 | 12.746 | 22.929 | 62.991 | 24.123 | 40.964 | 12.756 | 58.075 | 42.045 | 32.88 | 15.525 | 23.517 | 34.922 | 24.517 |
| 14 | 12.564 | 24.21 | 38.331 | 7.491 | 39.975 | 43.098 | 56.812 | 29.71 | 23.918 | 38.301 | 62.08 | 12.404 | 11.759 | 33.333 | 49.636 | 16.379 |
| 15 | 17.961 | 22.257 | 28.657 | 19.342 | 17.655 | 51.79 | 27.28 | 42.216 | 35.487 | 88.59 | 53.298 | 29.483 | 3.91 | 26.315 | 19.566 | 16.193 |
| 16 | 11.387 | 14.525 | 39.714 | 9.386 | 28.214 | 50.015 | 89.023 | 21.7 | 16.967 | 44.877 | 51.256 | 15.701 | 2.574 | 16.639 | 76.602 | 11.421 |
| 17 | 17.529 | 24.118 | 12.766 | 4.729 | 29.558 | 41.002 | 28.626 | 26.87 | 23.188 | 177.716 | 37.015 | 18.676 | 9.902 | 15.239 | 19.319 | 13.747 |
| 18 | 31.6 | 22.521 | 20.153 | 5.902 | 27.286 | 41.325 | 171.693 | 17.771 | 14.128 | 41.268 | 38.853 | 3.477 | 11.927 | 16.559 | 23.364 | 12.172 |
| 19 | 30.814 | 23.831 | 20.619 | 9.677 | 38.99 | 32.591 | 34.089 | 16.003 | 62.352 | 132.526 | 39.941 | 19.244 | 0.0 | 14.019 | 20.056 | 5.248 |
| 20 | 25.946 | 52.043 | 41.348 | 12.819 | 28.641 | 130.532 | 23.585 | 20.207 | 20.583 | 43.043 | 34.612 | 16.467 | 6.86 | 14.596 | 16.4 | 12.317 |
| 21 | 17.515 | 20.156 | 38.323 | 6.037 | 58.929 | 32.365 | 94.647 | 54.273 | 32.649 | 19.273 | 44.295 | 19.729 | 8.676 | 12.642 | 32.294 | 8.198 |
| 22 | 42.743 | 32.705 | 19.801 | 22.52 | 30.758 | 26.068 | 9.568 | 18.042 | 44.168 | 69.217 | 75.834 | 20.34 | 9.885 | 25.035 | 24.882 | 28.434 |
PWM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | -0.724 | -1.113 | -1.879 | 0.994 | -1.015 | -0.216 | -0.977 | 0.917 | -0.359 | 0.208 | -1.121 | 1.136 | -1.198 | -0.703 | -0.868 | 0.529 |
| 02 | -0.994 | -1.479 | -0.125 | -1.003 | -0.398 | -0.584 | -1.033 | 0.243 | -3.017 | -1.289 | -1.131 | -0.466 | -0.751 | -0.383 | 1.911 | 0.744 |
| 03 | -0.023 | -3.061 | -0.938 | -1.918 | 0.131 | -2.262 | -1.004 | -2.026 | 1.914 | -1.301 | -0.701 | -0.261 | 0.58 | -1.095 | 0.649 | -1.078 |
| 04 | -1.248 | 2.215 | -0.286 | -0.714 | -4.4 | -0.689 | -3.061 | -1.626 | -3.302 | 1.068 | -2.335 | -2.094 | -2.477 | 0.158 | -2.107 | -4.4 |
| 05 | -2.142 | -2.376 | -1.621 | -4.4 | 0.919 | -0.396 | 2.345 | -2.073 | -1.511 | -2.444 | -0.361 | -4.4 | -3.241 | -2.792 | -0.344 | -4.4 |
| 06 | -4.4 | -2.436 | -3.265 | 1.01 | -4.4 | -4.4 | -4.4 | -0.131 | -1.629 | -0.264 | -2.596 | 2.398 | -4.4 | -3.054 | -4.4 | -2.398 |
| 07 | -4.4 | -1.629 | -4.4 | -4.4 | -4.4 | -0.165 | -3.165 | -4.4 | -3.054 | -2.724 | -4.4 | -4.4 | -1.631 | 2.664 | -3.292 | -2.103 |
| 08 | -1.583 | -4.4 | -3.282 | -4.4 | 2.682 | -1.895 | -0.75 | -1.483 | -4.4 | -3.292 | -3.165 | -4.4 | -2.103 | -4.4 | -4.4 | -4.4 |
| 09 | -1.006 | 1.862 | 0.711 | 1.812 | -4.4 | -4.4 | -3.063 | -1.961 | -4.4 | -1.562 | -1.825 | -1.708 | -4.4 | -2.635 | -3.076 | -2.012 |
| 10 | -2.385 | -2.561 | -2.565 | -1.855 | 0.786 | 0.694 | -0.244 | 0.559 | -0.299 | 0.045 | -1.386 | -1.375 | -0.056 | 1.182 | -0.381 | 0.524 |
| 11 | 0.053 | 0.071 | 0.435 | -1.206 | 0.892 | 0.135 | 0.613 | -0.045 | -1.155 | -1.166 | -0.148 | -1.188 | -0.232 | -0.675 | 0.229 | 0.253 |
| 12 | 0.195 | 0.013 | 0.521 | -0.371 | -0.159 | 0.026 | -1.166 | -0.165 | -0.023 | 0.474 | 0.716 | -0.126 | -1.154 | 0.162 | -0.488 | -0.297 |
| 13 | 0.004 | -0.22 | 0.129 | -0.879 | -0.305 | 0.695 | -0.255 | 0.268 | -0.878 | 0.614 | 0.294 | 0.05 | -0.687 | -0.28 | 0.11 | -0.239 |
| 14 | -0.893 | -0.252 | 0.202 | -1.39 | 0.244 | 0.318 | 0.592 | -0.05 | -0.264 | 0.201 | 0.68 | -0.906 | -0.957 | 0.064 | 0.458 | -0.635 |
| 15 | -0.545 | -0.334 | -0.085 | -0.472 | -0.562 | 0.5 | -0.134 | 0.298 | 0.126 | 1.034 | 0.529 | -0.057 | -1.996 | -0.17 | -0.461 | -0.646 |
| 16 | -0.988 | -0.752 | 0.237 | -1.175 | -0.101 | 0.466 | 1.039 | -0.359 | -0.6 | 0.358 | 0.49 | -0.676 | -2.368 | -0.62 | 0.889 | -0.985 |
| 17 | -0.569 | -0.255 | -0.878 | -1.822 | -0.055 | 0.269 | -0.087 | -0.149 | -0.294 | 1.728 | 0.167 | -0.507 | -1.123 | -0.705 | -0.473 | -0.806 |
| 18 | 0.011 | -0.323 | -0.432 | -1.615 | -0.134 | 0.276 | 1.694 | -0.555 | -0.779 | 0.275 | 0.215 | -2.102 | -0.944 | -0.624 | -0.287 | -0.924 |
| 19 | -0.014 | -0.267 | -0.409 | -1.145 | 0.219 | 0.041 | 0.086 | -0.658 | 0.685 | 1.435 | 0.243 | -0.477 | -4.4 | -0.787 | -0.437 | -1.725 |
| 20 | -0.183 | 0.505 | 0.277 | -0.874 | -0.086 | 1.42 | -0.277 | -0.429 | -0.411 | 0.317 | 0.101 | -0.63 | -1.474 | -0.747 | -0.634 | -0.912 |
| 21 | -0.569 | -0.432 | 0.202 | -1.594 | 0.629 | 0.035 | 1.1 | 0.547 | 0.043 | -0.476 | 0.345 | -0.453 | -1.25 | -0.887 | 0.032 | -1.304 |
| 22 | 0.31 | 0.045 | -0.449 | -0.323 | -0.016 | -0.179 | -1.156 | -0.54 | 0.342 | 0.788 | 0.879 | -0.423 | -1.125 | -0.219 | -0.225 | -0.093 |