Model info
| Transcription factor | CREB3L2 | ||||||||
| Model | CR3L2_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 13 | ||||||||
| Quality | D | ||||||||
| Consensus | YKvWSACGTGdnv | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 1223 | ||||||||
| TF family | CREB-related factors{1.1.7} | ||||||||
| TF subfamily | CREB-3-like factors{1.1.7.2} | ||||||||
| HGNC | 23720 | ||||||||
| EntrezGene | 64764 | ||||||||
| UniProt ID | CR3L2_HUMAN | ||||||||
| UniProt AC | Q70SY1 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 133.0 | 183.0 | 124.0 | 779.0 |
| 02 | 106.25 | 101.25 | 882.25 | 129.25 |
| 03 | 525.0 | 226.0 | 257.0 | 211.0 |
| 04 | 160.0 | 99.0 | 30.0 | 930.0 |
| 05 | 4.25 | 265.25 | 884.25 | 65.25 |
| 06 | 1210.25 | 1.25 | 3.25 | 4.25 |
| 07 | 3.0 | 1206.0 | 6.0 | 4.0 |
| 08 | 0.0 | 2.0 | 1215.0 | 2.0 |
| 09 | 2.5 | 4.5 | 4.5 | 1207.5 |
| 10 | 5.5 | 10.5 | 1198.5 | 4.5 |
| 11 | 164.0 | 154.0 | 717.0 | 184.0 |
| 12 | 165.0 | 729.0 | 160.0 | 165.0 |
| 13 | 660.75 | 174.75 | 215.75 | 167.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.822 | -0.506 | -0.891 | 0.935 |
| 02 | -1.043 | -1.09 | 1.059 | -0.85 |
| 03 | 0.541 | -0.297 | -0.169 | -0.365 |
| 04 | -0.639 | -1.112 | -2.267 | 1.112 |
| 05 | -3.929 | -0.138 | 1.061 | -1.52 |
| 06 | 1.375 | -4.618 | -4.111 | -3.929 |
| 07 | -4.162 | 1.371 | -3.674 | -3.972 |
| 08 | -5.151 | -4.397 | 1.379 | -4.397 |
| 09 | -4.272 | -3.889 | -3.889 | 1.372 |
| 10 | -3.741 | -3.218 | 1.365 | -3.889 |
| 11 | -0.615 | -0.677 | 0.852 | -0.501 |
| 12 | -0.609 | 0.869 | -0.639 | -0.609 |
| 13 | 0.771 | -0.552 | -0.343 | -0.592 |