Transcription factor | Nr2f2 | ||||||||
Model | COT2_MOUSE.H10MO.S | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 15 | ||||||||
Quality | S | ||||||||
Consensus | vRGKbCAdRGRKYvv | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 82 | ||||||||
TF family | RXR-related receptors (NR2){2.1.3} | ||||||||
TF subfamily | COUP-like receptors (NR2F){2.1.3.5} | ||||||||
MGI | 1352452 | ||||||||
EntrezGene | 11819 | ||||||||
UniProt ID | COT2_MOUSE | ||||||||
UniProt AC | P43135 | ||||||||
Comment | Secondary motif. | ||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 32.017 | 16.88 | 23.106 | 6.94 |
02 | 43.87 | 0.914 | 20.907 | 13.252 |
03 | 7.197 | 2.171 | 62.606 | 6.969 |
04 | 5.027 | 1.028 | 56.037 | 16.851 |
05 | 7.426 | 9.825 | 16.451 | 45.241 |
06 | 0.0 | 72.203 | 4.57 | 2.171 |
07 | 71.746 | 4.113 | 0.0 | 3.085 |
08 | 42.956 | 7.426 | 20.564 | 7.997 |
09 | 43.242 | 3.085 | 21.992 | 10.625 |
10 | 14.395 | 0.0 | 59.293 | 5.255 |
11 | 11.539 | 5.37 | 51.753 | 10.282 |
12 | 7.226 | 8.768 | 16.708 | 46.241 |
13 | 5.141 | 48.669 | 9.368 | 15.766 |
14 | 45.812 | 10.511 | 15.766 | 6.855 |
15 | 33.474 | 18.736 | 14.852 | 11.882 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.464 | -0.147 | 0.15 | -0.953 |
02 | 0.77 | -2.34 | 0.055 | -0.373 |
03 | -0.921 | -1.854 | 1.118 | -0.949 |
04 | -1.225 | -2.285 | 1.009 | -0.149 |
05 | -0.894 | -0.646 | -0.172 | 0.8 |
06 | -2.948 | 1.258 | -1.303 | -1.854 |
07 | 1.252 | -1.387 | -2.948 | -1.607 |
08 | 0.749 | -0.894 | 0.039 | -0.829 |
09 | 0.755 | -1.607 | 0.103 | -0.575 |
10 | -0.296 | -2.948 | 1.064 | -1.188 |
11 | -0.5 | -1.17 | 0.931 | -0.605 |
12 | -0.918 | -0.748 | -0.157 | 0.821 |
13 | -1.206 | 0.871 | -0.689 | -0.211 |
14 | 0.812 | -0.585 | -0.211 | -0.964 |
15 | 0.507 | -0.049 | -0.267 | -0.473 |