Model info
| Transcription factor | Nr2f2 | ||||||||
| Model | COT2_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 10 | ||||||||
| Quality | B | ||||||||
| Consensus | MWRAGGTCAd | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 79 | ||||||||
| TF family | RXR-related receptors (NR2){2.1.3} | ||||||||
| TF subfamily | COUP-like receptors (NR2F){2.1.3.5} | ||||||||
| MGI | 1352452 | ||||||||
| EntrezGene | 11819 | ||||||||
| UniProt ID | COT2_MOUSE | ||||||||
| UniProt AC | P43135 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 12.281 | 49.297 | 6.683 | 8.511 |
| 02 | 46.669 | 9.482 | 8.226 | 12.396 |
| 03 | 45.87 | 5.827 | 21.65 | 3.427 |
| 04 | 58.951 | 0.0 | 15.537 | 2.285 |
| 05 | 0.0 | 0.0 | 76.773 | 0.0 |
| 06 | 0.914 | 0.0 | 64.263 | 11.596 |
| 07 | 1.028 | 0.0 | 0.571 | 75.173 |
| 08 | 1.028 | 70.718 | 2.056 | 2.97 |
| 09 | 69.804 | 3.884 | 3.085 | 0.0 |
| 10 | 36.844 | 7.712 | 21.992 | 10.225 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.417 | 0.91 | -0.959 | -0.748 |
| 02 | 0.857 | -0.652 | -0.778 | -0.408 |
| 03 | 0.84 | -1.076 | 0.114 | -1.503 |
| 04 | 1.085 | -2.928 | -0.199 | -1.795 |
| 05 | -2.928 | -2.928 | 1.345 | -2.928 |
| 06 | -2.317 | -2.928 | 1.17 | -0.469 |
| 07 | -2.261 | -2.928 | -2.505 | 1.325 |
| 08 | -2.261 | 1.264 | -1.865 | -1.609 |
| 09 | 1.252 | -1.406 | -1.582 | -2.928 |
| 10 | 0.626 | -0.835 | 0.129 | -0.584 |