Model info
| Transcription factor | CEBPA | ||||||||
| Model | CEBPA_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 13 | ||||||||
| Quality | A | ||||||||
| Consensus | dRTTRWGCAAYhd | ||||||||
| wAUC | 0.927761083518841 | ||||||||
| Best AUC | 0.9373153732051268 | ||||||||
| Benchmark datasets | 3 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | C/EBP-related{1.1.8} | ||||||||
| TF subfamily | C/EBP{1.1.8.1} | ||||||||
| HGNC | 1833 | ||||||||
| EntrezGene | 1050 | ||||||||
| UniProt ID | CEBPA_HUMAN | ||||||||
| UniProt AC | P49715 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 131.254 | 45.192 | 110.608 | 212.947 |
| 02 | 245.17 | 42.874 | 209.01 | 2.946 |
| 03 | 0.0 | 0.0 | 0.0 | 500.0 |
| 04 | 0.0 | 0.0 | 75.936 | 424.064 |
| 05 | 114.721 | 2.169 | 285.776 | 97.334 |
| 06 | 64.857 | 33.193 | 32.712 | 369.238 |
| 07 | 0.0 | 0.0 | 500.0 | 0.0 |
| 08 | 63.745 | 398.733 | 0.0 | 37.522 |
| 09 | 500.0 | 0.0 | 0.0 | 0.0 |
| 10 | 500.0 | 0.0 | 0.0 | 0.0 |
| 11 | 4.987 | 177.3 | 35.368 | 282.346 |
| 12 | 172.228 | 179.334 | 41.383 | 107.056 |
| 13 | 161.88 | 75.327 | 87.48 | 175.313 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.048 | -0.996 | -0.121 | 0.528 |
| 02 | 0.668 | -1.047 | 0.509 | -3.337 |
| 03 | -4.4 | -4.4 | -4.4 | 1.377 |
| 04 | -4.4 | -4.4 | -0.491 | 1.213 |
| 05 | -0.085 | -3.526 | 0.82 | -0.247 |
| 06 | -0.645 | -1.293 | -1.307 | 1.075 |
| 07 | -4.4 | -4.4 | 1.377 | -4.4 |
| 08 | -0.662 | 1.152 | -4.4 | -1.175 |
| 09 | 1.377 | -4.4 | -4.4 | -4.4 |
| 10 | 1.377 | -4.4 | -4.4 | -4.4 |
| 11 | -2.963 | 0.346 | -1.232 | 0.808 |
| 12 | 0.317 | 0.357 | -1.081 | -0.153 |
| 13 | 0.256 | -0.498 | -0.352 | 0.335 |