Model info
Transcription factorCDC5L
ModelCDC5L_HUMAN.H10MO.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length15
Quality
D
ConsensusvbGnKdTAAYRWAWb
wAUC
Best AUC
Benchmark datasets
Aligned words10
TF familyMyb/SANT domain factors{3.5.1}
TF subfamilyMyb-like factors{3.5.1.1}
HGNC1743
EntrezGene988
UniProt IDCDC5L_HUMAN
UniProt ACQ99459
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.9061
0.0005 5.5671
0.0001 6.9401
PCM
ACGT
011.51.56.50.5
020.02.04.04.0
032.00.08.00.0
045.01.01.03.0
050.01.03.06.0
062.00.02.06.0
071.00.00.09.0
089.00.01.00.0
098.00.00.02.0
101.06.00.03.0
116.00.03.01.0
122.01.00.07.0
138.01.01.00.0
146.00.01.03.0
150.752.751.754.75
PWM
ACGT
01-0.393-0.3930.833-1.051
02-1.676-0.1770.3970.397
03-0.177-1.6761.025-1.676
040.595-0.669-0.6690.151
05-1.676-0.6690.1510.76
06-0.177-1.676-0.1770.76
07-0.669-1.676-1.6761.136
081.136-1.676-0.669-1.676
091.025-1.676-1.676-0.177
10-0.6690.76-1.6760.151
110.76-1.6760.151-0.669
12-0.177-0.669-1.6760.901
131.025-0.669-0.669-1.676
140.76-1.676-0.6690.151
15-0.8420.078-0.280.549