Transcription factor | CDC5L | ||||||||
Model | CDC5L_HUMAN.H10MO.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 15 | ||||||||
Quality | D | ||||||||
Consensus | vbGnKdTAAYRWAWb | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 10 | ||||||||
TF family | Myb/SANT domain factors{3.5.1} | ||||||||
TF subfamily | Myb-like factors{3.5.1.1} | ||||||||
HGNC | 1743 | ||||||||
EntrezGene | 988 | ||||||||
UniProt ID | CDC5L_HUMAN | ||||||||
UniProt AC | Q99459 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 1.5 | 1.5 | 6.5 | 0.5 |
02 | 0.0 | 2.0 | 4.0 | 4.0 |
03 | 2.0 | 0.0 | 8.0 | 0.0 |
04 | 5.0 | 1.0 | 1.0 | 3.0 |
05 | 0.0 | 1.0 | 3.0 | 6.0 |
06 | 2.0 | 0.0 | 2.0 | 6.0 |
07 | 1.0 | 0.0 | 0.0 | 9.0 |
08 | 9.0 | 0.0 | 1.0 | 0.0 |
09 | 8.0 | 0.0 | 0.0 | 2.0 |
10 | 1.0 | 6.0 | 0.0 | 3.0 |
11 | 6.0 | 0.0 | 3.0 | 1.0 |
12 | 2.0 | 1.0 | 0.0 | 7.0 |
13 | 8.0 | 1.0 | 1.0 | 0.0 |
14 | 6.0 | 0.0 | 1.0 | 3.0 |
15 | 0.75 | 2.75 | 1.75 | 4.75 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.393 | -0.393 | 0.833 | -1.051 |
02 | -1.676 | -0.177 | 0.397 | 0.397 |
03 | -0.177 | -1.676 | 1.025 | -1.676 |
04 | 0.595 | -0.669 | -0.669 | 0.151 |
05 | -1.676 | -0.669 | 0.151 | 0.76 |
06 | -0.177 | -1.676 | -0.177 | 0.76 |
07 | -0.669 | -1.676 | -1.676 | 1.136 |
08 | 1.136 | -1.676 | -0.669 | -1.676 |
09 | 1.025 | -1.676 | -1.676 | -0.177 |
10 | -0.669 | 0.76 | -1.676 | 0.151 |
11 | 0.76 | -1.676 | 0.151 | -0.669 |
12 | -0.177 | -0.669 | -1.676 | 0.901 |
13 | 1.025 | -0.669 | -0.669 | -1.676 |
14 | 0.76 | -1.676 | -0.669 | 0.151 |
15 | -0.842 | 0.078 | -0.28 | 0.549 |