Model info
| Transcription factor | Bhlhe40 | ||||||||
| Model | BHE40_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 9 | ||||||||
| Quality | B | ||||||||
| Consensus | KCACGTGMb | ||||||||
| wAUC | 0.8828224771457921 | ||||||||
| Best AUC | 0.8828224771457921 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 2327 | ||||||||
| TF family | Hairy-related factors{1.2.4} | ||||||||
| TF subfamily | Hairy-like factors{1.2.4.1} | ||||||||
| MGI | 1097714 | ||||||||
| EntrezGene | 20893 | ||||||||
| UniProt ID | BHE40_MOUSE | ||||||||
| UniProt AC | O35185 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 223.576 | 11.297 | 1199.827 | 602.299 |
| 02 | 168.704 | 1865.632 | 1.36 | 1.304 |
| 03 | 1995.392 | 41.608 | 0.0 | 0.0 |
| 04 | 3.245 | 1923.168 | 68.417 | 42.17 |
| 05 | 102.453 | 4.188 | 1927.257 | 3.102 |
| 06 | 91.948 | 54.883 | 23.799 | 1866.369 |
| 07 | 0.0 | 0.0 | 2037.0 | 0.0 |
| 08 | 1397.715 | 302.663 | 173.173 | 163.449 |
| 09 | 152.025 | 1040.81 | 616.344 | 227.821 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.818 | -3.656 | 0.855 | 0.167 |
| 02 | -1.097 | 1.296 | -5.053 | -5.071 |
| 03 | 1.363 | -2.464 | -5.592 | -5.592 |
| 04 | -4.598 | 1.326 | -1.984 | -2.451 |
| 05 | -1.589 | -4.429 | 1.328 | -4.626 |
| 06 | -1.695 | -2.197 | -2.99 | 1.296 |
| 07 | -5.592 | -5.592 | 1.383 | -5.592 |
| 08 | 1.007 | -0.518 | -1.071 | -1.129 |
| 09 | -1.2 | 0.713 | 0.19 | -0.8 |