Model info
| Transcription factor | BHLHE23 | ||||||||
| Model | BHE23_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 12 | ||||||||
| Quality | D | ||||||||
| Consensus | dvnRKRTGKKdb | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 394 | ||||||||
| TF family | Tal-related factors{1.2.3} | ||||||||
| TF subfamily | Neurogenin / Atonal-like factors{1.2.3.4} | ||||||||
| HGNC | 16093 | ||||||||
| EntrezGene | 128408 | ||||||||
| UniProt ID | BHE23_HUMAN | ||||||||
| UniProt AC | Q8NDY6 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 161.75 | 38.75 | 128.75 | 62.75 |
| 02 | 93.5 | 75.5 | 157.5 | 65.5 |
| 03 | 46.25 | 195.25 | 104.25 | 46.25 |
| 04 | 226.25 | 13.25 | 113.25 | 39.25 |
| 05 | 44.0 | 11.0 | 94.0 | 243.0 |
| 06 | 223.0 | 7.0 | 114.0 | 48.0 |
| 07 | 41.0 | 1.0 | 0.0 | 350.0 |
| 08 | 0.0 | 0.0 | 392.0 | 0.0 |
| 09 | 5.0 | 22.0 | 241.0 | 124.0 |
| 10 | 38.5 | 47.5 | 56.5 | 249.5 |
| 11 | 79.75 | 44.75 | 157.75 | 109.75 |
| 12 | 56.75 | 75.75 | 149.75 | 109.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.495 | -0.905 | 0.269 | -0.437 |
| 02 | -0.046 | -0.256 | 0.469 | -0.396 |
| 03 | -0.734 | 0.682 | 0.061 | -0.734 |
| 04 | 0.828 | -1.909 | 0.143 | -0.893 |
| 05 | -0.783 | -2.075 | -0.041 | 0.899 |
| 06 | 0.814 | -2.461 | 0.149 | -0.698 |
| 07 | -0.851 | -3.687 | -4.199 | 1.262 |
| 08 | -4.199 | -4.199 | 1.375 | -4.199 |
| 09 | -2.729 | -1.443 | 0.891 | 0.232 |
| 10 | -0.911 | -0.708 | -0.54 | 0.925 |
| 11 | -0.203 | -0.766 | 0.47 | 0.112 |
| 12 | -0.535 | -0.253 | 0.419 | 0.112 |