Model info
| Transcription factor | BHLHE22 | ||||||||
| Model | BHE22_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 13 | ||||||||
| Quality | D | ||||||||
| Consensus | dvCATATGTTYhh | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 2250 | ||||||||
| TF family | Tal-related factors{1.2.3} | ||||||||
| TF subfamily | Neurogenin / Atonal-like factors{1.2.3.4} | ||||||||
| HGNC | 11963 | ||||||||
| EntrezGene | 27319 | ||||||||
| UniProt ID | BHE22_HUMAN | ||||||||
| UniProt AC | Q8NFJ8 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1322.5 | 240.5 | 439.5 | 243.5 |
| 02 | 691.5 | 857.5 | 477.5 | 219.5 |
| 03 | 0.0 | 2246.0 | 0.0 | 0.0 |
| 04 | 2244.0 | 0.0 | 2.0 | 0.0 |
| 05 | 0.0 | 0.0 | 0.0 | 2246.0 |
| 06 | 2246.0 | 0.0 | 0.0 | 0.0 |
| 07 | 0.0 | 0.0 | 0.0 | 2246.0 |
| 08 | 0.0 | 0.0 | 2246.0 | 0.0 |
| 09 | 0.0 | 116.0 | 417.0 | 1713.0 |
| 10 | 13.5 | 26.5 | 13.5 | 2192.5 |
| 11 | 240.75 | 255.75 | 133.75 | 1615.75 |
| 12 | 424.0 | 425.0 | 234.0 | 1163.0 |
| 13 | 417.75 | 357.75 | 325.75 | 1144.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.855 | -0.843 | -0.244 | -0.831 |
| 02 | 0.208 | 0.422 | -0.161 | -0.934 |
| 03 | -5.677 | 1.384 | -5.677 | -5.677 |
| 04 | 1.383 | -5.677 | -4.966 | -5.677 |
| 05 | -5.677 | -5.677 | -5.677 | 1.384 |
| 06 | 1.384 | -5.677 | -5.677 | -5.677 |
| 07 | -5.677 | -5.677 | -5.677 | 1.384 |
| 08 | -5.677 | -5.677 | 1.384 | -5.677 |
| 09 | -5.677 | -1.564 | -0.296 | 1.113 |
| 10 | -3.598 | -2.987 | -3.598 | 1.36 |
| 11 | -0.842 | -0.782 | -1.424 | 1.055 |
| 12 | -0.28 | -0.277 | -0.871 | 0.726 |
| 13 | -0.295 | -0.449 | -0.542 | 0.711 |