Model info
| Transcription factor | Bcl6 | ||||||||
| Model | BCL6_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 13 | ||||||||
| Quality | C | ||||||||
| Consensus | dTYCCTRGAvRKh | ||||||||
| wAUC | 0.728609363450918 | ||||||||
| Best AUC | 0.7708335218509506 | ||||||||
| Benchmark datasets | 3 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | BCL6 factors{2.3.3.22} | ||||||||
| MGI | 107187 | ||||||||
| EntrezGene | 12053 | ||||||||
| UniProt ID | BCL6_MOUSE | ||||||||
| UniProt AC | P41183 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 148.678 | 61.405 | 95.606 | 194.311 |
| 02 | 45.956 | 15.98 | 34.789 | 403.274 |
| 03 | 44.583 | 54.813 | 41.26 | 359.343 |
| 04 | 42.018 | 413.066 | 21.116 | 23.8 |
| 05 | 31.837 | 390.63 | 6.345 | 71.188 |
| 06 | 1.026 | 10.526 | 6.603 | 481.845 |
| 07 | 197.293 | 19.414 | 269.473 | 13.82 |
| 08 | 60.712 | 11.059 | 424.203 | 4.027 |
| 09 | 431.296 | 17.917 | 37.208 | 13.579 |
| 10 | 272.358 | 69.08 | 126.788 | 31.774 |
| 11 | 362.081 | 19.939 | 76.353 | 41.627 |
| 12 | 59.501 | 24.454 | 312.579 | 103.467 |
| 13 | 114.262 | 204.729 | 68.96 | 112.049 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.172 | -0.698 | -0.264 | 0.437 |
| 02 | -0.98 | -1.977 | -1.248 | 1.163 |
| 03 | -1.009 | -0.809 | -1.084 | 1.048 |
| 04 | -1.066 | 1.187 | -1.72 | -1.608 |
| 05 | -1.332 | 1.131 | -2.774 | -0.554 |
| 06 | -3.893 | -2.349 | -2.742 | 1.34 |
| 07 | 0.452 | -1.798 | 0.762 | -2.108 |
| 08 | -0.709 | -2.306 | 1.213 | -3.121 |
| 09 | 1.23 | -1.872 | -1.183 | -2.124 |
| 10 | 0.772 | -0.583 | 0.014 | -1.334 |
| 11 | 1.055 | -1.773 | -0.485 | -1.075 |
| 12 | -0.729 | -1.582 | 0.909 | -0.187 |
| 13 | -0.089 | 0.489 | -0.585 | -0.108 |