Model info
| Transcription factor | BCL6 | ||||||||
| Model | BCL6_HUMAN.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 16 | ||||||||
| Quality | C | ||||||||
| Consensus | dddddhWTTCnWRGRW | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 32 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | BCL6 factors{2.3.3.22} | ||||||||
| HGNC | 1001 | ||||||||
| EntrezGene | 604 | ||||||||
| UniProt ID | BCL6_HUMAN | ||||||||
| UniProt AC | P41182 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 12.475 | 4.678 | 7.381 | 8.109 |
| 02 | 16.946 | 1.871 | 5.51 | 8.317 |
| 03 | 13.931 | 2.599 | 9.564 | 6.55 |
| 04 | 12.189 | 2.105 | 8.551 | 9.798 |
| 05 | 8.317 | 1.871 | 15.802 | 6.653 |
| 06 | 5.042 | 18.245 | 3.379 | 5.978 |
| 07 | 9.356 | 2.807 | 1.04 | 19.441 |
| 08 | 3.976 | 1.17 | 0.234 | 27.264 |
| 09 | 3.041 | 1.17 | 0.234 | 28.199 |
| 10 | 0.0 | 30.772 | 0.936 | 0.936 |
| 11 | 3.976 | 8.655 | 3.976 | 16.036 |
| 12 | 19.337 | 0.0 | 1.871 | 11.436 |
| 13 | 7.381 | 3.743 | 21.52 | 0.0 |
| 14 | 3.743 | 0.0 | 24.95 | 3.95 |
| 15 | 23.417 | 1.17 | 6.783 | 1.274 |
| 16 | 19.7 | 1.403 | 5.354 | 6.186 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.39 | -0.487 | -0.09 | -0.006 |
| 02 | 0.679 | -1.192 | -0.347 | 0.017 |
| 03 | 0.494 | -0.957 | 0.144 | -0.197 |
| 04 | 0.369 | -1.11 | 0.042 | 0.167 |
| 05 | 0.017 | -1.192 | 0.613 | -0.183 |
| 06 | -0.424 | 0.75 | -0.754 | -0.277 |
| 07 | 0.124 | -0.898 | -1.553 | 0.81 |
| 08 | -0.622 | -1.487 | -2.101 | 1.136 |
| 09 | -0.837 | -1.487 | -2.101 | 1.169 |
| 10 | -2.338 | 1.254 | -1.609 | -1.609 |
| 11 | -0.622 | 0.053 | -0.622 | 0.627 |
| 12 | 0.805 | -2.338 | -1.192 | 0.309 |
| 13 | -0.09 | -0.672 | 0.908 | -2.338 |
| 14 | -0.672 | -2.338 | 1.05 | -0.628 |
| 15 | 0.989 | -1.487 | -0.165 | -1.438 |
| 16 | 0.823 | -1.379 | -0.372 | -0.247 |