Model info
| Transcription factor | Batf | ||||||||
| Model | BATF_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 10 | ||||||||
| Quality | B | ||||||||
| Consensus | vTGAGTCAbh | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 1924 | ||||||||
| TF family | B-ATF-related factors{1.1.4} | ||||||||
| TF subfamily | B-ATF{1.1.4.0.1} | ||||||||
| MGI | 1859147 | ||||||||
| EntrezGene | 53314 | ||||||||
| UniProt ID | BATF_MOUSE | ||||||||
| UniProt AC | O35284 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 773.125 | 570.768 | 269.244 | 264.972 |
| 02 | 92.336 | 0.0 | 19.449 | 1766.324 |
| 03 | 0.0 | 65.134 | 1639.238 | 173.737 |
| 04 | 1799.383 | 0.0 | 6.754 | 71.972 |
| 05 | 0.0 | 0.0 | 1760.466 | 117.643 |
| 06 | 0.996 | 20.724 | 65.952 | 1790.437 |
| 07 | 165.458 | 1707.918 | 4.733 | 0.0 |
| 08 | 1865.213 | 0.0 | 0.0 | 12.896 |
| 09 | 231.03 | 266.703 | 491.853 | 888.523 |
| 10 | 727.733 | 355.968 | 174.404 | 620.004 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.497 | 0.195 | -0.553 | -0.569 |
| 02 | -1.61 | -5.522 | -3.095 | 1.322 |
| 03 | -5.522 | -1.951 | 1.247 | -0.987 |
| 04 | 1.341 | -5.522 | -3.999 | -1.854 |
| 05 | -5.522 | -5.522 | 1.319 | -1.372 |
| 06 | -5.098 | -3.037 | -1.939 | 1.336 |
| 07 | -1.036 | 1.288 | -4.266 | -5.522 |
| 08 | 1.376 | -5.522 | -5.522 | -3.462 |
| 09 | -0.705 | -0.563 | 0.046 | 0.636 |
| 10 | 0.437 | -0.276 | -0.984 | 0.277 |