Model info
| Transcription factor | BATF3 | ||||||||
| Model | BATF3_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 12 | ||||||||
| Quality | D | ||||||||
| Consensus | hhnYRYTTMCSd | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 63 | ||||||||
| TF family | B-ATF-related factors{1.1.4} | ||||||||
| TF subfamily | B-ATF-3{1.1.4.0.3} | ||||||||
| HGNC | 28915 | ||||||||
| EntrezGene | 55509 | ||||||||
| UniProt ID | BATF3_HUMAN | ||||||||
| UniProt AC | Q9NR55 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 12.5 | 21.5 | 8.5 | 20.5 |
| 02 | 20.75 | 13.75 | 5.75 | 22.75 |
| 03 | 12.75 | 11.75 | 12.75 | 25.75 |
| 04 | 2.25 | 22.25 | 2.25 | 36.25 |
| 05 | 31.0 | 0.0 | 23.0 | 9.0 |
| 06 | 9.0 | 20.0 | 2.0 | 32.0 |
| 07 | 1.0 | 0.0 | 4.0 | 58.0 |
| 08 | 1.0 | 0.0 | 10.0 | 52.0 |
| 09 | 45.25 | 12.25 | 2.25 | 3.25 |
| 10 | 0.5 | 59.5 | 1.5 | 1.5 |
| 11 | 3.75 | 5.75 | 48.75 | 4.75 |
| 12 | 10.25 | 8.25 | 17.25 | 27.25 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.215 | 0.295 | -0.565 | 0.249 |
| 02 | 0.261 | -0.127 | -0.906 | 0.349 |
| 03 | -0.197 | -0.272 | -0.197 | 0.467 |
| 04 | -1.631 | 0.327 | -1.631 | 0.798 |
| 05 | 0.646 | -2.785 | 0.359 | -0.514 |
| 06 | -0.514 | 0.226 | -1.71 | 0.677 |
| 07 | -2.11 | -2.785 | -1.204 | 1.258 |
| 08 | -2.11 | -2.785 | -0.419 | 1.15 |
| 09 | 1.014 | -0.234 | -1.631 | -1.365 |
| 10 | -2.391 | 1.283 | -1.89 | -1.89 |
| 11 | -1.255 | -0.906 | 1.087 | -1.065 |
| 12 | -0.397 | -0.592 | 0.086 | 0.522 |