Model info
| Transcription factor | Bach1 | ||||||||
| Model | BACH1_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 14 | ||||||||
| Quality | C | ||||||||
| Consensus | YGCTGAGTCAYGST | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 8 | ||||||||
| TF family | Jun-related factors{1.1.1} | ||||||||
| TF subfamily | NF-E2-like factors{1.1.1.2} | ||||||||
| MGI | 894680 | ||||||||
| EntrezGene | 12013 | ||||||||
| UniProt ID | BACH1_MOUSE | ||||||||
| UniProt AC | P97302 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1.096 | 1.973 | 0.0 | 4.932 |
| 02 | 0.877 | 0.0 | 7.123 | 0.0 |
| 03 | 0.0 | 8.0 | 0.0 | 0.0 |
| 04 | 0.0 | 0.877 | 0.0 | 7.123 |
| 05 | 0.0 | 0.0 | 8.0 | 0.0 |
| 06 | 7.123 | 0.0 | 0.0 | 0.877 |
| 07 | 0.0 | 1.973 | 6.027 | 0.0 |
| 08 | 0.0 | 0.0 | 0.0 | 8.0 |
| 09 | 0.0 | 8.0 | 0.0 | 0.0 |
| 10 | 8.0 | 0.0 | 0.0 | 0.0 |
| 11 | 1.096 | 3.068 | 0.0 | 3.836 |
| 12 | 0.877 | 0.0 | 6.027 | 1.096 |
| 13 | 0.0 | 2.082 | 5.041 | 0.877 |
| 14 | 0.0 | 0.0 | 0.0 | 8.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.444 | -0.011 | -1.578 | 0.772 |
| 02 | -0.59 | -1.578 | 1.11 | -1.578 |
| 03 | -1.578 | 1.218 | -1.578 | -1.578 |
| 04 | -1.578 | -0.59 | -1.578 | 1.11 |
| 05 | -1.578 | -1.578 | 1.218 | -1.578 |
| 06 | 1.11 | -1.578 | -1.578 | -0.59 |
| 07 | -1.578 | -0.011 | 0.955 | -1.578 |
| 08 | -1.578 | -1.578 | -1.578 | 1.218 |
| 09 | -1.578 | 1.218 | -1.578 | -1.578 |
| 10 | 1.218 | -1.578 | -1.578 | -1.578 |
| 11 | -0.444 | 0.353 | -1.578 | 0.547 |
| 12 | -0.59 | -1.578 | 0.955 | -0.444 |
| 13 | -1.578 | 0.032 | 0.792 | -0.59 |
| 14 | -1.578 | -1.578 | -1.578 | 1.218 |