Model info
| Transcription factor | Atf2 | ||||||||
| Model | ATF2_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 9 | ||||||||
| Quality | B | ||||||||
| Consensus | vTGAYGThM | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 109 | ||||||||
| TF family | Jun-related factors{1.1.1} | ||||||||
| TF subfamily | ATF-2-like factors{1.1.1.3} | ||||||||
| MGI | 109349 | ||||||||
| EntrezGene | 102641666; 11909 | ||||||||
| UniProt ID | ATF2_MOUSE | ||||||||
| UniProt AC | P16951 | ||||||||
| Comment | Model is applicable to several TFs or complex subunits: ATF2_MOUSE, ATF4_MOUSE. | ||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 26.164 | 21.705 | 33.1 | 8.825 |
| 02 | 0.0 | 0.0 | 0.0 | 89.794 |
| 03 | 0.0 | 2.106 | 85.459 | 2.229 |
| 04 | 89.794 | 0.0 | 0.0 | 0.0 |
| 05 | 0.991 | 69.234 | 7.06 | 12.509 |
| 06 | 0.0 | 2.849 | 82.982 | 3.963 |
| 07 | 4.83 | 8.422 | 2.229 | 74.312 |
| 08 | 28.239 | 46.507 | 7.183 | 7.865 |
| 09 | 70.565 | 8.019 | 5.914 | 5.295 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.146 | -0.032 | 0.373 | -0.863 |
| 02 | -3.043 | -3.043 | -3.043 | 1.35 |
| 03 | -3.043 | -1.988 | 1.301 | -1.95 |
| 04 | 1.35 | -3.043 | -3.043 | -3.043 |
| 05 | -2.411 | 1.094 | -1.058 | -0.548 |
| 06 | -3.043 | -1.781 | 1.272 | -1.533 |
| 07 | -1.376 | -0.904 | -1.95 | 1.163 |
| 08 | 0.22 | 0.703 | -1.043 | -0.964 |
| 09 | 1.112 | -0.947 | -1.209 | -1.301 |