Model info
| Transcription factor | ASCL2 | ||||||||
| Model | ASCL2_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 14 | ||||||||
| Quality | D | ||||||||
| Consensus | ddKnGYRGSWGSnd | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 80 | ||||||||
| TF family | MyoD / ASC-related factors{1.2.2} | ||||||||
| TF subfamily | Achaete-Scute-like factors{1.2.2.2} | ||||||||
| HGNC | 739 | ||||||||
| EntrezGene | 430 | ||||||||
| UniProt ID | ASCL2_HUMAN | ||||||||
| UniProt AC | Q99929 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 16.75 | 9.75 | 34.75 | 18.75 |
| 02 | 12.25 | 9.25 | 25.25 | 33.25 |
| 03 | 7.75 | 1.75 | 48.75 | 21.75 |
| 04 | 32.5 | 6.5 | 34.5 | 6.5 |
| 05 | 16.25 | 0.25 | 63.25 | 0.25 |
| 06 | 6.25 | 43.25 | 1.25 | 29.25 |
| 07 | 35.25 | 1.25 | 34.25 | 9.25 |
| 08 | 3.0 | 1.0 | 72.0 | 4.0 |
| 09 | 1.0 | 28.0 | 49.0 | 2.0 |
| 10 | 20.0 | 0.0 | 17.0 | 43.0 |
| 11 | 2.75 | 0.75 | 70.75 | 5.75 |
| 12 | 3.0 | 17.0 | 47.0 | 13.0 |
| 13 | 6.75 | 6.75 | 37.75 | 28.75 |
| 14 | 13.25 | 7.25 | 32.25 | 27.25 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.167 | -0.665 | 0.53 | -0.061 |
| 02 | -0.458 | -0.713 | 0.222 | 0.487 |
| 03 | -0.869 | -2.003 | 0.86 | 0.08 |
| 04 | 0.465 | -1.022 | 0.523 | -1.022 |
| 05 | -0.196 | -2.752 | 1.115 | -2.752 |
| 06 | -1.055 | 0.743 | -2.197 | 0.364 |
| 07 | 0.544 | -2.197 | 0.516 | -0.713 |
| 08 | -1.639 | -2.309 | 1.243 | -1.421 |
| 09 | -2.309 | 0.322 | 0.865 | -1.919 |
| 10 | 0.0 | -2.958 | -0.153 | 0.737 |
| 11 | -1.702 | -2.436 | 1.225 | -1.125 |
| 12 | -1.639 | -0.153 | 0.824 | -0.403 |
| 13 | -0.989 | -0.989 | 0.611 | 0.347 |
| 14 | -0.386 | -0.927 | 0.458 | 0.295 |