Transcription factor | ARNT | ||||||||
Model | ARNT_HUMAN.H10MO.B | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 8 | ||||||||
Quality | B | ||||||||
Consensus | bYACGTGh | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 283 | ||||||||
TF family | PAS domain factors{1.2.5} | ||||||||
TF subfamily | Arnt-like factors{1.2.5.2} | ||||||||
HGNC | 700 | ||||||||
EntrezGene | 405 | ||||||||
UniProt ID | ARNT_HUMAN | ||||||||
UniProt AC | P27540 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 27.551 | 66.002 | 63.374 | 110.872 |
02 | 12.601 | 139.091 | 16.5 | 99.607 |
03 | 145.565 | 0.0 | 122.233 | 0.0 |
04 | 0.0 | 267.798 | 0.0 | 0.0 |
05 | 0.0 | 0.0 | 267.798 | 0.0 |
06 | 0.0 | 0.0 | 0.0 | 267.798 |
07 | 0.0 | 0.0 | 267.798 | 0.0 |
08 | 50.292 | 148.117 | 14.296 | 55.093 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.859 | -0.014 | -0.054 | 0.496 |
02 | -1.586 | 0.721 | -1.34 | 0.391 |
03 | 0.766 | -3.89 | 0.593 | -3.89 |
04 | -3.89 | 1.371 | -3.89 | -3.89 |
05 | -3.89 | -3.89 | 1.371 | -3.89 |
06 | -3.89 | -3.89 | -3.89 | 1.371 |
07 | -3.89 | -3.89 | 1.371 | -3.89 |
08 | -0.279 | 0.783 | -1.471 | -0.191 |