Model info
| Transcription factor | Tfap2d | ||||||||
| Model | AP2D_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 14 | ||||||||
| Quality | D | ||||||||
| Consensus | nGbCCGRGGCnCGY | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 5 | ||||||||
| TF family | AP-2{1.3.1} | ||||||||
| TF subfamily | AP-2delta{1.3.1.0.4} | ||||||||
| MGI | 2153466 | ||||||||
| EntrezGene | 226896 | ||||||||
| UniProt ID | AP2D_MOUSE | ||||||||
| UniProt AC | Q91ZK0 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1.163 | 2.442 | 1.163 | 0.233 |
| 02 | 0.0 | 0.0 | 5.0 | 0.0 |
| 03 | 0.0 | 3.14 | 0.93 | 0.93 |
| 04 | 0.0 | 5.0 | 0.0 | 0.0 |
| 05 | 0.0 | 3.023 | 0.0 | 1.977 |
| 06 | 0.0 | 0.0 | 5.0 | 0.0 |
| 07 | 1.977 | 1.163 | 1.86 | 0.0 |
| 08 | 0.0 | 0.0 | 5.0 | 0.0 |
| 09 | 0.0 | 0.0 | 5.0 | 0.0 |
| 10 | 0.0 | 4.07 | 0.93 | 0.0 |
| 11 | 0.93 | 1.163 | 1.977 | 0.93 |
| 12 | 0.0 | 4.07 | 0.93 | 0.0 |
| 13 | 0.0 | 0.93 | 4.07 | 0.0 |
| 14 | 0.233 | 1.163 | 0.233 | 3.372 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.054 | 0.543 | -0.054 | -0.956 |
| 02 | -1.413 | -1.413 | 1.185 | -1.413 |
| 03 | -1.413 | 0.762 | -0.215 | -0.215 |
| 04 | -1.413 | 1.185 | -1.413 | -1.413 |
| 05 | -1.413 | 0.729 | -1.413 | 0.365 |
| 06 | -1.413 | -1.413 | 1.185 | -1.413 |
| 07 | 0.365 | -0.054 | 0.314 | -1.413 |
| 08 | -1.413 | -1.413 | 1.185 | -1.413 |
| 09 | -1.413 | -1.413 | 1.185 | -1.413 |
| 10 | -1.413 | 0.996 | -0.215 | -1.413 |
| 11 | -0.215 | -0.054 | 0.365 | -0.215 |
| 12 | -1.413 | 0.996 | -0.215 | -1.413 |
| 13 | -1.413 | -0.215 | 0.996 | -1.413 |
| 14 | -0.956 | -0.054 | -0.956 | 0.826 |