Model info
| Transcription factor | Tfap2c | ||||||||
| Model | AP2C_MOUSE.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 9 | ||||||||
| Quality | A | ||||||||
| Consensus | SCCYGvGGS | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 1615 | ||||||||
| TF family | AP-2{1.3.1} | ||||||||
| TF subfamily | AP-2gamma{1.3.1.0.3} | ||||||||
| MGI | 106032 | ||||||||
| EntrezGene | 21420 | ||||||||
| UniProt ID | AP2C_MOUSE | ||||||||
| UniProt AC | Q61312 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.711 | 610.823 | 961.118 | 24.37 |
| 02 | 0.841 | 1572.171 | 0.654 | 25.355 |
| 03 | 25.375 | 1567.33 | 0.221 | 6.096 |
| 04 | 16.004 | 380.679 | 35.521 | 1166.818 |
| 05 | 12.672 | 0.0 | 1416.677 | 169.672 |
| 06 | 580.819 | 330.495 | 628.587 | 59.121 |
| 07 | 314.994 | 0.592 | 1282.229 | 1.207 |
| 08 | 31.703 | 0.569 | 1564.455 | 2.294 |
| 09 | 76.103 | 892.995 | 570.591 | 59.332 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -4.479 | 0.422 | 0.875 | -2.729 |
| 02 | -5.008 | 1.366 | -5.08 | -2.692 |
| 03 | -2.692 | 1.363 | -5.27 | -3.924 |
| 04 | -3.114 | -0.049 | -2.375 | 1.068 |
| 05 | -3.32 | -5.383 | 1.262 | -0.851 |
| 06 | 0.372 | -0.189 | 0.451 | -1.885 |
| 07 | -0.237 | -5.105 | 1.162 | -4.88 |
| 08 | -2.483 | -5.114 | 1.361 | -4.575 |
| 09 | -1.639 | 0.801 | 0.354 | -1.882 |