Transcription factor | TFAP2C | ||||||||
Model | AP2C_HUMAN.H10MO.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | ChIP-Seq | ||||||||
Model length | 14 | ||||||||
Quality | A | ||||||||
Consensus | vddSCCTGRGGShv | ||||||||
wAUC | 0.8193851755779543 | ||||||||
Best AUC | 0.9000521863508143 | ||||||||
Benchmark datasets | 4 | ||||||||
Aligned words | 501 | ||||||||
TF family | AP-2{1.3.1} | ||||||||
TF subfamily | AP-2gamma{1.3.1.0.3} | ||||||||
HGNC | 11744 | ||||||||
EntrezGene | 7022 | ||||||||
UniProt ID | AP2C_HUMAN | ||||||||
UniProt AC | Q92754 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 193.614 | 100.515 | 134.783 | 71.088 |
02 | 98.037 | 61.799 | 83.2 | 256.963 |
03 | 92.298 | 49.886 | 259.215 | 98.601 |
04 | 4.767 | 253.52 | 235.946 | 5.767 |
05 | 1.902 | 494.142 | 3.957 | 0.0 |
06 | 0.934 | 475.911 | 1.172 | 21.982 |
07 | 25.008 | 65.933 | 12.689 | 396.371 |
08 | 17.682 | 0.0 | 458.604 | 23.714 |
09 | 277.519 | 12.699 | 207.919 | 1.863 |
10 | 36.72 | 0.0 | 462.294 | 0.985 |
11 | 0.0 | 0.0 | 499.058 | 0.942 |
12 | 14.466 | 309.124 | 170.509 | 5.902 |
13 | 156.963 | 175.77 | 48.576 | 118.691 |
14 | 214.138 | 85.26 | 120.834 | 79.768 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.433 | -0.215 | 0.074 | -0.555 |
02 | -0.24 | -0.692 | -0.401 | 0.714 |
03 | -0.299 | -0.9 | 0.723 | -0.234 |
04 | -2.997 | 0.701 | 0.63 | -2.85 |
05 | -3.601 | 1.365 | -3.134 | -4.4 |
06 | -3.929 | 1.328 | -3.838 | -1.682 |
07 | -1.561 | -0.629 | -2.184 | 1.146 |
08 | -1.884 | -4.4 | 1.291 | -1.611 |
09 | 0.791 | -2.184 | 0.504 | -3.612 |
10 | -1.196 | -4.4 | 1.299 | -3.909 |
11 | -4.4 | -4.4 | 1.375 | -3.926 |
12 | -2.067 | 0.898 | 0.307 | -2.832 |
13 | 0.225 | 0.337 | -0.926 | -0.051 |
14 | 0.533 | -0.377 | -0.033 | -0.442 |