Model info
| Transcription factor | AR | ||||||||
| Model | ANDR_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 17 | ||||||||
| Quality | A | ||||||||
| Consensus | dKnWCWbnbTGTWCYhd | ||||||||
| wAUC | 0.8282984403719046 | ||||||||
| Best AUC | 0.9054643086369122 | ||||||||
| Benchmark datasets | 6 | ||||||||
| Aligned words | 489 | ||||||||
| TF family | Steroid hormone receptors (NR3){2.1.1} | ||||||||
| TF subfamily | GR-like receptors (NR3C){2.1.1.1} | ||||||||
| HGNC | 644 | ||||||||
| EntrezGene | 367 | ||||||||
| UniProt ID | ANDR_HUMAN | ||||||||
| UniProt AC | P10275 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 196.65 | 11.469 | 142.231 | 138.65 |
| 02 | 22.168 | 0.93 | 362.847 | 103.055 |
| 03 | 69.932 | 131.276 | 120.785 | 167.008 |
| 04 | 371.224 | 32.797 | 26.324 | 58.655 |
| 05 | 1.022 | 425.044 | 38.428 | 24.506 |
| 06 | 304.432 | 19.068 | 44.643 | 120.857 |
| 07 | 35.265 | 143.528 | 160.468 | 149.74 |
| 08 | 140.15 | 94.424 | 74.419 | 180.006 |
| 09 | 72.403 | 223.019 | 109.295 | 84.283 |
| 10 | 48.859 | 11.399 | 1.999 | 426.743 |
| 11 | 15.232 | 9.856 | 462.972 | 0.94 |
| 12 | 12.042 | 17.63 | 5.635 | 453.693 |
| 13 | 85.992 | 59.713 | 41.353 | 301.942 |
| 14 | 4.782 | 423.134 | 1.878 | 59.206 |
| 15 | 35.75 | 232.148 | 10.918 | 210.184 |
| 16 | 120.691 | 111.207 | 62.805 | 194.297 |
| 17 | 88.337 | 53.562 | 156.205 | 190.896 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.471 | -2.252 | 0.15 | 0.124 |
| 02 | -1.653 | -3.911 | 1.08 | -0.168 |
| 03 | -0.549 | 0.07 | -0.012 | 0.309 |
| 04 | 1.102 | -1.282 | -1.491 | -0.721 |
| 05 | -3.875 | 1.237 | -1.13 | -1.558 |
| 06 | 0.905 | -1.793 | -0.986 | -0.011 |
| 07 | -1.213 | 0.159 | 0.269 | 0.201 |
| 08 | 0.135 | -0.255 | -0.488 | 0.383 |
| 09 | -0.515 | 0.596 | -0.111 | -0.366 |
| 10 | -0.899 | -2.258 | -3.553 | 1.241 |
| 11 | -1.998 | -2.385 | 1.322 | -3.907 |
| 12 | -2.209 | -1.865 | -2.847 | 1.302 |
| 13 | -0.347 | -0.704 | -1.06 | 0.897 |
| 14 | -2.973 | 1.233 | -3.587 | -0.712 |
| 15 | -1.2 | 0.635 | -2.296 | 0.537 |
| 16 | -0.013 | -0.093 | -0.654 | 0.459 |
| 17 | -0.32 | -0.809 | 0.242 | 0.441 |