Model info
| Transcription factor | ALX4 | ||||||||
| Model | ALX4_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 12 | ||||||||
| Quality | D | ||||||||
| Consensus | TAATYTAATTAd | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 23663 | ||||||||
| TF family | Paired-related HD factors{3.1.3} | ||||||||
| TF subfamily | ALX{3.1.3.1} | ||||||||
| HGNC | 450 | ||||||||
| EntrezGene | 60529 | ||||||||
| UniProt ID | ALX4_HUMAN | ||||||||
| UniProt AC | Q9H161 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 216.245 | 126.148 | 114.877 | 22765.935 |
| 02 | 22543.98 | 89.808 | 231.862 | 357.555 |
| 03 | 23019.594 | 57.988 | 84.297 | 61.326 |
| 04 | 206.338 | 685.513 | 212.188 | 22119.166 |
| 05 | 24.028 | 9046.751 | 417.865 | 13734.561 |
| 06 | 0.0 | 4990.288 | 0.0 | 18232.917 |
| 07 | 22174.89 | 15.898 | 1024.684 | 7.734 |
| 08 | 23214.017 | 1.256 | 7.932 | 0.0 |
| 09 | 0.314 | 0.942 | 0.314 | 23221.635 |
| 10 | 71.432 | 19.442 | 3.974 | 23128.357 |
| 11 | 23049.307 | 23.615 | 37.827 | 112.456 |
| 12 | 8840.919 | 3216.246 | 7295.084 | 3870.956 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -3.279 | -3.81 | -3.902 | 1.366 |
| 02 | 1.356 | -4.142 | -3.21 | -2.781 |
| 03 | 1.377 | -4.564 | -4.203 | -4.511 |
| 04 | -3.325 | -2.133 | -3.298 | 1.337 |
| 05 | -5.388 | 0.443 | -2.626 | 0.861 |
| 06 | -7.745 | -0.151 | -7.745 | 1.144 |
| 07 | 1.34 | -5.754 | -1.732 | -6.34 |
| 08 | 1.386 | -7.34 | -6.321 | -7.745 |
| 09 | -7.628 | -7.427 | -7.628 | 1.386 |
| 10 | -4.364 | -5.578 | -6.797 | 1.382 |
| 11 | 1.378 | -5.404 | -4.97 | -3.922 |
| 12 | 0.42 | -0.59 | 0.228 | -0.405 |