Transcription factor | ALX1 | ||||||||
Model | ALX1_HUMAN.H10MO.B | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 12 | ||||||||
Quality | B | ||||||||
Consensus | vTRATYGnATTA | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 33 | ||||||||
TF family | Paired-related HD factors{3.1.3} | ||||||||
TF subfamily | ALX{3.1.3.1} | ||||||||
HGNC | 1494 | ||||||||
EntrezGene | 8092 | ||||||||
UniProt ID | ALX1_HUMAN | ||||||||
UniProt AC | Q15699 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 13.542 | 6.481 | 8.467 | 2.51 |
02 | 1.986 | 2.979 | 0.0 | 26.036 |
03 | 23.94 | 0.993 | 3.089 | 2.979 |
04 | 26.918 | 1.986 | 0.0 | 2.096 |
05 | 0.0 | 2.979 | 0.0 | 28.021 |
06 | 0.993 | 7.06 | 3.972 | 18.975 |
07 | 15.004 | 0.0 | 15.996 | 0.0 |
08 | 11.032 | 7.943 | 11.032 | 0.993 |
09 | 24.05 | 0.0 | 3.972 | 2.979 |
10 | 3.089 | 0.0 | 0.993 | 26.918 |
11 | 1.986 | 0.993 | 0.993 | 27.028 |
12 | 25.705 | 1.765 | 1.765 | 1.765 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.515 | -0.159 | 0.08 | -0.938 |
02 | -1.107 | -0.808 | -2.305 | 1.139 |
03 | 1.058 | -1.537 | -0.78 | -0.808 |
04 | 1.171 | -1.107 | -2.305 | -1.069 |
05 | -2.305 | -0.808 | -2.305 | 1.21 |
06 | -1.537 | -0.083 | -0.578 | 0.835 |
07 | 0.611 | -2.305 | 0.672 | -2.305 |
08 | 0.323 | 0.022 | 0.323 | -1.537 |
09 | 1.062 | -2.305 | -0.578 | -0.808 |
10 | -0.78 | -2.305 | -1.537 | 1.171 |
11 | -1.107 | -1.537 | -1.537 | 1.175 |
12 | 1.127 | -1.188 | -1.188 | -1.188 |