Model info
| Transcription factor | Znf423 | ||||||||
| Model | ZN423_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 15 | ||||||||
| Quality | D | ||||||||
| Consensus | GGCACCCAAGGGTGC | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 22 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers{2.3.4} | ||||||||
| TF subfamily | ZNF423-like factors{2.3.4.12} | ||||||||
| MGI | 1891217 | ||||||||
| EntrezGene | 94187 | ||||||||
| UniProt ID | ZN423_MOUSE | ||||||||
| UniProt AC | Q80TS5 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.0 | 0.0 | 22.0 | 0.0 |
| 02 | 9.0 | 0.0 | 13.0 | 0.0 |
| 03 | 0.0 | 22.0 | 0.0 | 0.0 |
| 04 | 22.0 | 0.0 | 0.0 | 0.0 |
| 05 | 0.0 | 22.0 | 0.0 | 0.0 |
| 06 | 0.0 | 22.0 | 0.0 | 0.0 |
| 07 | 0.0 | 22.0 | 0.0 | 0.0 |
| 08 | 12.0 | 0.0 | 0.0 | 10.0 |
| 09 | 21.0 | 0.0 | 0.0 | 1.0 |
| 10 | 0.0 | 0.0 | 22.0 | 0.0 |
| 11 | 0.0 | 0.0 | 22.0 | 0.0 |
| 12 | 0.0 | 0.0 | 22.0 | 0.0 |
| 13 | 0.0 | 0.0 | 0.0 | 22.0 |
| 14 | 0.0 | 0.0 | 22.0 | 0.0 |
| 15 | 4.0 | 18.0 | 0.0 | 0.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -2.094 | -2.094 | 1.289 | -2.094 |
| 02 | 0.443 | -2.094 | 0.786 | -2.094 |
| 03 | -2.094 | 1.289 | -2.094 | -2.094 |
| 04 | 1.289 | -2.094 | -2.094 | -2.094 |
| 05 | -2.094 | 1.289 | -2.094 | -2.094 |
| 06 | -2.094 | 1.289 | -2.094 | -2.094 |
| 07 | -2.094 | 1.289 | -2.094 | -2.094 |
| 08 | 0.711 | -2.094 | -2.094 | 0.541 |
| 09 | 1.244 | -2.094 | -2.094 | -1.264 |
| 10 | -2.094 | -2.094 | 1.289 | -2.094 |
| 11 | -2.094 | -2.094 | 1.289 | -2.094 |
| 12 | -2.094 | -2.094 | 1.289 | -2.094 |
| 13 | -2.094 | -2.094 | -2.094 | 1.289 |
| 14 | -2.094 | -2.094 | 1.289 | -2.094 |
| 15 | -0.273 | 1.096 | -2.094 | -2.094 |