Model info
| Transcription factor | Tfcp2l1 | ||||||||
| Model | TF2L1_MOUSE.H10DI.C | ||||||||
| Model type | Dinucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 23 | ||||||||
| Quality | C | ||||||||
| Consensus | nndRdCYRGhhdRARCYRGhhhn | ||||||||
| wAUC | 0.9573716300086532 | ||||||||
| Best AUC | 0.9573716300086532 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 488 | ||||||||
| TF family | CP2-related factors{6.7.2} | ||||||||
| TF subfamily | CP2-L1 (LBP-9, CRTR-1){6.7.2.0.2} | ||||||||
| MGI | 2444691 | ||||||||
| EntrezGene | 81879 | ||||||||
| UniProt ID | TF2L1_MOUSE | ||||||||
| UniProt AC | Q3UNW5 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | 23.535 | 11.099 | 49.484 | 6.954 | 56.709 | 28.183 | 20.186 | 57.397 | 31.855 | 13.014 | 31.009 | 17.006 | 21.174 | 26.698 | 56.544 | 19.227 |
| 02 | 29.992 | 8.122 | 86.473 | 8.685 | 34.427 | 12.126 | 8.994 | 23.446 | 55.838 | 17.224 | 71.146 | 13.016 | 23.239 | 14.832 | 52.432 | 10.082 |
| 03 | 94.143 | 6.931 | 35.236 | 7.186 | 34.279 | 4.957 | 7.165 | 5.903 | 132.129 | 15.873 | 56.109 | 14.934 | 18.048 | 1.896 | 27.58 | 7.704 |
| 04 | 143.381 | 16.637 | 77.043 | 41.539 | 8.816 | 2.139 | 3.902 | 14.8 | 40.538 | 7.041 | 49.75 | 28.761 | 11.07 | 2.005 | 6.742 | 15.909 |
| 05 | 0.0 | 192.883 | 10.922 | 0.0 | 0.0 | 27.822 | 0.0 | 0.0 | 0.947 | 123.537 | 12.952 | 0.0 | 0.0 | 100.0 | 1.009 | 0.0 |
| 06 | 0.0 | 0.947 | 0.0 | 0.0 | 76.56 | 219.716 | 0.0 | 147.967 | 0.0 | 19.676 | 0.0 | 5.207 | 0.0 | 0.0 | 0.0 | 0.0 |
| 07 | 8.647 | 0.0 | 67.913 | 0.0 | 124.921 | 0.0 | 101.239 | 14.179 | 0.0 | 0.0 | 0.0 | 0.0 | 13.715 | 1.05 | 134.424 | 3.986 |
| 08 | 0.0 | 3.74 | 143.543 | 0.0 | 0.0 | 0.0 | 1.05 | 0.0 | 0.0 | 22.897 | 279.761 | 0.918 | 0.0 | 0.0 | 18.165 | 0.0 |
| 09 | 0.0 | 0.0 | 0.0 | 0.0 | 9.883 | 12.844 | 0.0 | 3.91 | 124.427 | 123.001 | 23.061 | 172.031 | 0.0 | 0.0 | 0.0 | 0.918 |
| 10 | 43.482 | 44.952 | 20.674 | 25.201 | 14.751 | 39.864 | 10.285 | 70.944 | 2.861 | 9.987 | 4.233 | 5.98 | 10.167 | 83.703 | 23.475 | 59.513 |
| 11 | 24.938 | 11.995 | 23.03 | 11.299 | 58.495 | 20.071 | 4.957 | 94.983 | 13.593 | 15.134 | 18.914 | 11.027 | 38.578 | 2.05 | 67.462 | 53.549 |
| 12 | 38.279 | 11.911 | 79.768 | 5.646 | 31.954 | 0.913 | 16.383 | 0.0 | 33.923 | 12.623 | 60.848 | 6.969 | 32.912 | 9.785 | 124.17 | 3.99 |
| 13 | 106.987 | 0.0 | 27.169 | 2.912 | 34.246 | 0.0 | 0.985 | 0.0 | 244.158 | 0.0 | 36.091 | 0.92 | 10.721 | 0.0 | 4.934 | 0.95 |
| 14 | 227.458 | 1.993 | 102.367 | 64.294 | 0.0 | 0.0 | 0.0 | 0.0 | 33.519 | 0.0 | 22.959 | 12.702 | 0.95 | 0.0 | 0.92 | 2.912 |
| 15 | 0.0 | 256.841 | 5.086 | 0.0 | 0.0 | 1.993 | 0.0 | 0.0 | 0.0 | 121.394 | 3.906 | 0.947 | 0.0 | 77.762 | 1.008 | 1.137 |
| 16 | 0.0 | 0.0 | 0.0 | 0.0 | 38.68 | 265.125 | 0.0 | 154.184 | 0.0 | 8.095 | 0.0 | 1.906 | 0.0 | 2.084 | 0.0 | 0.0 |
| 17 | 7.217 | 0.0 | 31.462 | 0.0 | 143.322 | 1.902 | 115.258 | 14.822 | 0.0 | 0.0 | 0.0 | 0.0 | 13.659 | 1.991 | 138.53 | 1.91 |
| 18 | 0.916 | 0.0 | 163.282 | 0.0 | 1.0 | 0.0 | 2.892 | 0.0 | 0.0 | 4.706 | 280.544 | 0.0 | 0.0 | 0.0 | 16.733 | 0.0 |
| 19 | 0.0 | 1.0 | 0.0 | 0.916 | 0.0 | 2.741 | 0.0 | 1.966 | 97.34 | 129.375 | 13.998 | 222.738 | 0.0 | 0.0 | 0.0 | 0.0 |
| 20 | 37.605 | 23.847 | 8.003 | 27.885 | 13.651 | 46.111 | 6.034 | 67.321 | 2.729 | 7.431 | 0.929 | 2.909 | 11.852 | 78.032 | 12.794 | 122.942 |
| 21 | 18.282 | 8.832 | 10.758 | 27.964 | 31.056 | 25.797 | 2.808 | 95.76 | 5.063 | 9.048 | 4.886 | 8.764 | 28.43 | 67.623 | 44.531 | 80.473 |
| 22 | 10.923 | 19.875 | 42.887 | 9.147 | 41.416 | 31.912 | 12.833 | 25.138 | 10.213 | 15.862 | 23.873 | 13.034 | 24.052 | 39.056 | 97.833 | 52.019 |
PWM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | -0.219 | -0.952 | 0.516 | -1.4 | 0.651 | -0.041 | -0.369 | 0.663 | 0.08 | -0.798 | 0.053 | -0.537 | -0.323 | -0.094 | 0.648 | -0.417 |
| 02 | 0.02 | -1.252 | 1.071 | -1.188 | 0.157 | -0.867 | -1.155 | -0.222 | 0.636 | -0.525 | 0.877 | -0.798 | -0.231 | -0.671 | 0.574 | -1.045 |
| 03 | 1.156 | -1.403 | 0.18 | -1.369 | 0.152 | -1.718 | -1.372 | -1.555 | 1.493 | -0.605 | 0.641 | -0.664 | -0.479 | -2.569 | -0.062 | -1.303 |
| 04 | 1.575 | -0.559 | 0.956 | 0.343 | -1.174 | -2.468 | -1.938 | -0.673 | 0.318 | -1.388 | 0.521 | -0.021 | -0.955 | -2.522 | -1.429 | -0.603 |
| 05 | -4.349 | 1.871 | -0.968 | -4.349 | -4.349 | -0.054 | -4.349 | -4.349 | -3.107 | 1.426 | -0.803 | -4.349 | -4.349 | 1.216 | -3.061 | -4.349 |
| 06 | -4.349 | -3.107 | -4.349 | -4.349 | 0.95 | 2.001 | -4.349 | 1.606 | -4.349 | -0.395 | -4.349 | -1.672 | -4.349 | -4.349 | -4.349 | -4.349 |
| 07 | -1.193 | -4.349 | 0.831 | -4.349 | 1.437 | -4.349 | 1.228 | -0.715 | -4.349 | -4.349 | -4.349 | -4.349 | -0.747 | -3.033 | 1.511 | -1.918 |
| 08 | -4.349 | -1.976 | 1.576 | -4.349 | -4.349 | -4.349 | -3.033 | -4.349 | -4.349 | -0.246 | 2.242 | -3.129 | -4.349 | -4.349 | -0.473 | -4.349 |
| 09 | -4.349 | -4.349 | -4.349 | -4.349 | -1.064 | -0.811 | -4.349 | -1.936 | 1.433 | 1.422 | -0.239 | 1.757 | -4.349 | -4.349 | -4.349 | -3.129 |
| 10 | 0.388 | 0.421 | -0.346 | -0.151 | -0.676 | 0.302 | -1.026 | 0.874 | -2.216 | -1.054 | -1.863 | -1.543 | -1.037 | 1.039 | -0.221 | 0.699 |
| 11 | -0.162 | -0.877 | -0.24 | -0.935 | 0.682 | -0.375 | -1.718 | 1.164 | -0.756 | -0.651 | -0.433 | -0.959 | 0.269 | -2.503 | 0.824 | 0.594 |
| 12 | 0.262 | -0.884 | 0.991 | -1.596 | 0.083 | -3.133 | -0.574 | -4.349 | 0.142 | -0.828 | 0.721 | -1.398 | 0.112 | -1.074 | 1.431 | -1.918 |
| 13 | 1.283 | -4.349 | -0.077 | -2.2 | 0.151 | -4.349 | -3.079 | -4.349 | 2.106 | -4.349 | 0.203 | -3.127 | -0.986 | -4.349 | -1.722 | -3.105 |
| 14 | 2.035 | -2.527 | 1.239 | 0.776 | -4.349 | -4.349 | -4.349 | -4.349 | 0.13 | -4.349 | -0.243 | -0.822 | -3.105 | -4.349 | -3.127 | -2.2 |
| 15 | -4.349 | 2.157 | -1.694 | -4.349 | -4.349 | -2.527 | -4.349 | -4.349 | -4.349 | 1.409 | -1.937 | -3.107 | -4.349 | 0.965 | -3.062 | -2.973 |
| 16 | -4.349 | -4.349 | -4.349 | -4.349 | 0.272 | 2.188 | -4.349 | 1.647 | -4.349 | -1.256 | -4.349 | -2.565 | -4.349 | -2.49 | -4.349 | -4.349 |
| 17 | -1.365 | -4.349 | 0.068 | -4.349 | 1.574 | -2.566 | 1.357 | -0.672 | -4.349 | -4.349 | -4.349 | -4.349 | -0.751 | -2.528 | 1.541 | -2.563 |
| 18 | -3.131 | -4.349 | 1.705 | -4.349 | -3.068 | -4.349 | -2.206 | -4.349 | -4.349 | -1.766 | 2.245 | -4.349 | -4.349 | -4.349 | -0.553 | -4.349 |
| 19 | -4.349 | -3.068 | -4.349 | -3.131 | -4.349 | -2.254 | -4.349 | -2.539 | 1.189 | 1.472 | -0.727 | 2.014 | -4.349 | -4.349 | -4.349 | -4.349 |
| 20 | 0.244 | -0.206 | -1.267 | -0.052 | -0.752 | 0.446 | -1.534 | 0.822 | -2.258 | -1.337 | -3.12 | -2.201 | -0.889 | 0.969 | -0.815 | 1.422 |
| 21 | -0.467 | -1.172 | -0.983 | -0.049 | 0.055 | -0.128 | -2.232 | 1.173 | -1.698 | -1.149 | -1.731 | -1.18 | -0.032 | 0.826 | 0.411 | 0.999 |
| 22 | -0.968 | -0.385 | 0.374 | -1.139 | 0.34 | 0.082 | -0.812 | -0.154 | -1.033 | -0.605 | -0.205 | -0.797 | -0.197 | 0.281 | 1.194 | 0.566 |