STA5B_MOUSE.H10DI.C motif - HOmo sapiens COmprehensive MOdel COllection

Model info

Transcription factor

Stat5b

Model

STA5B_MOUSE.H10DI.C

Model type

Dinucleotide PWM

LOGO

LOGO (reverse complement)

Origin

ChIP-Seq

Model length

14

Quality

C

Consensus

ndTTCYTRGAAnhn

wAUC

0.9507193214364849

Best AUC

0.9507193214364849

Benchmark datasets

1

Aligned words

503

TF family

STAT factors{6.2.1}

TF subfamily

STAT5B{6.2.1.0.6}

MGI

103035

EntrezGene

20851

UniProt ID

STA5B_MOUSE

UniProt AC

P42232

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	6.0611
0.0005	8.4641
0.0001	13.3441

PCM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	44.592	23.873	48.258	61.442	23.406	16.738	6.177	40.873	28.779	23.418	28.22	42.14	5.863	17.175	27.958	61.088
02	0.0	0.944	0.0	101.696	0.0	0.0	0.976	80.229	0.0	1.066	0.0	109.547	0.0	0.0	0.0	205.543
03	0.0	0.0	0.0	0.0	0.0	1.066	0.0	0.944	0.0	0.0	0.0	0.976	24.093	4.055	0.0	468.866
04	0.0	23.1	0.0	0.993	0.941	4.18	0.0	0.0	0.0	0.0	0.0	0.0	6.268	461.783	0.0	2.735
05	0.0	7.21	0.0	0.0	20.509	134.396	4.959	329.199	0.0	0.0	0.0	0.0	0.0	2.837	0.0	0.89
06	0.0	0.0	13.888	6.621	0.0	0.0	8.518	135.924	0.0	0.0	2.948	2.01	0.0	0.0	204.63	125.46
07	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	160.62	1.978	55.097	12.289	102.029	3.033	156.916	8.038
08	4.063	1.816	254.929	1.841	0.0	0.0	5.011	0.0	2.894	0.0	208.205	0.914	0.0	1.065	19.263	0.0
09	6.957	0.0	0.0	0.0	1.995	0.0	0.0	0.886	438.056	3.867	0.942	44.542	2.755	0.0	0.0	0.0
10	438.245	2.943	7.576	0.999	3.867	0.0	0.0	0.0	0.942	0.0	0.0	0.0	42.662	1.871	0.894	0.0
11	178.33	110.544	85.313	111.53	1.958	0.0	0.958	1.898	3.771	1.831	1.86	1.008	0.0	0.0	0.0	0.999
12	47.884	40.707	27.108	68.361	26.084	17.275	1.876	67.141	17.962	28.065	10.798	31.305	17.923	24.365	22.388	50.759
13	25.891	27.609	34.489	21.865	41.523	33.996	4.86	30.033	20.379	14.697	16.925	10.167	28.128	58.759	87.473	43.206

PWM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	0.352	-0.265	0.43	0.67	-0.285	-0.614	-1.573	0.266	-0.081	-0.284	-0.101	0.296	-1.622	-0.589	-0.11	0.664
02	-4.4	-3.167	-4.4	1.171	-4.4	-4.4	-3.144	0.935	-4.4	-3.08	-4.4	1.246	-4.4	-4.4	-4.4	1.873
03	-4.4	-4.4	-4.4	-4.4	-4.4	-3.08	-4.4	-3.167	-4.4	-4.4	-4.4	-3.144	-0.256	-1.963	-4.4	2.697
04	-4.4	-0.298	-4.4	-3.131	-3.169	-1.935	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	-1.559	2.682	-4.4	-2.316
05	-4.4	-1.426	-4.4	-4.4	-0.415	1.449	-1.778	2.343	-4.4	-4.4	-4.4	-4.4	-4.4	-2.283	-4.4	-3.209
06	-4.4	-4.4	-0.796	-1.507	-4.4	-4.4	-1.268	1.461	-4.4	-4.4	-2.249	-2.579	-4.4	-4.4	1.869	1.381
07	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	1.627	-2.593	0.562	-0.915	1.175	-2.224	1.604	-1.323
08	-1.961	-2.664	2.088	-2.653	-4.4	-4.4	-1.768	-4.4	-2.266	-4.4	1.886	-3.19	-4.4	-3.081	-0.476	-4.4
09	-1.46	-4.4	-4.4	-4.4	-2.586	-4.4	-4.4	-3.212	2.629	-2.006	-3.169	0.351	-2.309	-4.4	-4.4	-4.4
10	2.629	-2.251	-1.379	-3.127	-2.006	-4.4	-4.4	-4.4	-3.169	-4.4	-4.4	-4.4	0.308	-2.639	-3.205	-4.4
11	1.731	1.255	0.996	1.263	-2.601	-4.4	-3.157	-2.627	-2.029	-2.657	-2.644	-3.121	-4.4	-4.4	-4.4	-3.127
12	0.422	0.262	-0.14	0.776	-0.178	-0.583	-2.637	0.758	-0.545	-0.106	-1.04	0.002	-0.547	-0.245	-0.329	0.48
13	-0.186	-0.122	0.097	-0.352	0.281	0.083	-1.796	-0.039	-0.421	-0.741	-0.603	-1.098	-0.104	0.626	1.021	0.321