Model info
| Transcription factor | Olig2 | ||||||||
| Model | OLIG2_MOUSE.H10DI.B | ||||||||
| Model type | Dinucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 23 | ||||||||
| Quality | B | ||||||||
| Consensus | nMCAKCTGbbnnShdbvhbbbnn | ||||||||
| wAUC | 0.8010924228351114 | ||||||||
| Best AUC | 0.8146213135592371 | ||||||||
| Benchmark datasets | 2 | ||||||||
| Aligned words | 502 | ||||||||
| TF family | Tal-related factors{1.2.3} | ||||||||
| TF subfamily | Neurogenin / Atonal-like factors{1.2.3.4} | ||||||||
| MGI | 1355331 | ||||||||
| EntrezGene | 50913 | ||||||||
| UniProt ID | OLIG2_MOUSE | ||||||||
| UniProt AC | Q9EQW6 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | 40.912 | 66.975 | 55.676 | 0.0 | 31.775 | 74.176 | 4.844 | 1.012 | 43.603 | 77.735 | 19.175 | 2.751 | 9.166 | 60.559 | 10.739 | 0.903 |
| 02 | 20.586 | 102.686 | 1.094 | 1.09 | 37.515 | 241.929 | 0.0 | 0.0 | 2.324 | 85.124 | 0.937 | 2.049 | 1.03 | 3.636 | 0.0 | 0.0 |
| 03 | 50.474 | 0.0 | 6.289 | 4.691 | 378.106 | 1.909 | 10.884 | 42.476 | 0.937 | 0.0 | 0.0 | 1.094 | 0.0 | 0.0 | 0.0 | 3.139 |
| 04 | 5.148 | 2.943 | 291.612 | 129.814 | 0.903 | 1.006 | 0.0 | 0.0 | 0.0 | 0.0 | 10.017 | 7.156 | 1.072 | 0.0 | 37.201 | 13.128 |
| 05 | 1.906 | 4.175 | 1.042 | 0.0 | 2.915 | 1.035 | 0.0 | 0.0 | 56.105 | 279.699 | 3.025 | 0.0 | 25.448 | 115.654 | 7.792 | 1.204 |
| 06 | 0.945 | 0.0 | 0.912 | 84.516 | 14.755 | 10.148 | 0.985 | 374.675 | 0.935 | 0.0 | 0.0 | 10.925 | 0.0 | 0.0 | 0.0 | 1.204 |
| 07 | 0.0 | 0.0 | 16.636 | 0.0 | 0.0 | 0.0 | 10.148 | 0.0 | 0.0 | 0.0 | 1.896 | 0.0 | 0.0 | 4.371 | 455.14 | 11.81 |
| 08 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.007 | 2.363 | 0.0 | 10.392 | 195.589 | 130.829 | 147.009 | 0.0 | 0.94 | 9.859 | 1.011 |
| 09 | 3.836 | 1.99 | 1.831 | 2.736 | 22.564 | 41.044 | 3.195 | 131.733 | 20.034 | 39.115 | 32.921 | 50.982 | 2.91 | 45.179 | 25.898 | 74.033 |
| 10 | 18.108 | 3.653 | 22.045 | 5.538 | 29.964 | 26.591 | 12.843 | 57.931 | 12.658 | 27.779 | 11.059 | 12.348 | 15.08 | 71.343 | 86.883 | 86.178 |
| 11 | 16.631 | 21.6 | 27.663 | 9.916 | 39.079 | 41.43 | 11.957 | 36.9 | 28.911 | 42.75 | 38.084 | 23.086 | 20.462 | 60.631 | 34.599 | 46.304 |
| 12 | 14.522 | 46.902 | 36.569 | 7.09 | 22.011 | 106.59 | 10.469 | 27.339 | 8.92 | 86.701 | 6.029 | 10.652 | 12.112 | 65.873 | 34.332 | 3.887 |
| 13 | 20.796 | 20.61 | 12.359 | 3.8 | 105.728 | 117.897 | 2.936 | 79.506 | 18.385 | 37.287 | 13.522 | 18.206 | 1.842 | 16.416 | 18.573 | 12.137 |
| 14 | 35.092 | 2.968 | 81.949 | 26.742 | 106.565 | 6.375 | 18.624 | 60.645 | 10.205 | 0.964 | 22.827 | 13.395 | 13.51 | 6.963 | 72.998 | 20.178 |
| 15 | 9.383 | 31.385 | 103.088 | 21.516 | 5.069 | 6.949 | 0.0 | 5.252 | 8.594 | 79.487 | 71.97 | 36.347 | 3.972 | 41.408 | 49.918 | 25.662 |
| 16 | 6.85 | 13.971 | 5.088 | 1.11 | 46.631 | 87.322 | 2.829 | 22.446 | 38.913 | 129.395 | 38.813 | 17.855 | 5.295 | 49.622 | 24.857 | 9.003 |
| 17 | 18.52 | 21.47 | 37.036 | 20.663 | 54.432 | 67.84 | 10.024 | 148.013 | 6.54 | 26.943 | 8.77 | 29.334 | 4.271 | 8.691 | 15.963 | 21.489 |
| 18 | 14.817 | 5.961 | 47.584 | 15.403 | 22.896 | 28.745 | 26.611 | 46.691 | 9.322 | 14.223 | 37.527 | 10.722 | 1.982 | 26.741 | 149.657 | 41.12 |
| 19 | 10.951 | 1.915 | 32.104 | 4.047 | 14.021 | 35.95 | 5.879 | 19.819 | 22.359 | 88.667 | 93.458 | 56.894 | 2.98 | 20.299 | 71.494 | 19.163 |
| 20 | 4.939 | 18.692 | 24.755 | 1.926 | 28.679 | 52.157 | 8.561 | 57.433 | 23.082 | 89.596 | 59.001 | 31.256 | 9.394 | 34.627 | 27.542 | 28.36 |
| 21 | 22.97 | 14.826 | 17.55 | 10.749 | 37.08 | 63.364 | 3.044 | 91.583 | 33.419 | 42.166 | 26.956 | 17.318 | 6.955 | 55.412 | 34.963 | 21.646 |
| 22 | 17.766 | 28.82 | 42.574 | 11.264 | 46.505 | 64.558 | 7.803 | 56.903 | 21.03 | 25.689 | 17.556 | 18.239 | 9.461 | 33.277 | 65.199 | 33.358 |
PWM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | 0.267 | 0.756 | 0.572 | -4.4 | 0.016 | 0.857 | -1.799 | -3.117 | 0.33 | 0.904 | -0.481 | -2.31 | -1.197 | 0.656 | -1.045 | -3.199 |
| 02 | -0.411 | 1.181 | -3.061 | -3.063 | 0.181 | 2.036 | -4.4 | -4.4 | -2.457 | 0.994 | -3.173 | -2.563 | -3.105 | -2.062 | -4.4 | -4.4 |
| 03 | 0.475 | -4.4 | -1.556 | -1.829 | 2.482 | -2.622 | -1.032 | 0.304 | -3.173 | -4.4 | -4.4 | -3.061 | -4.4 | -4.4 | -4.4 | -2.194 |
| 04 | -1.743 | -2.251 | 2.222 | 1.415 | -3.199 | -3.122 | -4.4 | -4.4 | -4.4 | -4.4 | -1.112 | -1.434 | -3.076 | -4.4 | 0.172 | -0.85 |
| 05 | -2.624 | -1.936 | -3.096 | -4.4 | -2.26 | -3.102 | -4.4 | -4.4 | 0.58 | 2.181 | -2.227 | -4.4 | -0.203 | 1.3 | -1.353 | -2.989 |
| 06 | -3.166 | -4.4 | -3.192 | 0.987 | -0.737 | -1.1 | -3.137 | 2.473 | -3.174 | -4.4 | -4.4 | -1.028 | -4.4 | -4.4 | -4.4 | -2.989 |
| 07 | -4.4 | -4.4 | -0.62 | -4.4 | -4.4 | -4.4 | -1.1 | -4.4 | -4.4 | -4.4 | -2.628 | -4.4 | -4.4 | -1.894 | 2.667 | -0.953 |
| 08 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -2.581 | -2.442 | -4.4 | -1.077 | 1.824 | 1.422 | 1.539 | -4.4 | -3.17 | -1.127 | -3.118 |
| 09 | -2.013 | -2.588 | -2.657 | -2.315 | -0.321 | 0.27 | -2.178 | 1.429 | -0.438 | 0.222 | 0.051 | 0.485 | -2.261 | 0.365 | -0.185 | 0.855 |
| 10 | -0.537 | -2.058 | -0.344 | -1.675 | -0.042 | -0.159 | -0.872 | 0.612 | -0.886 | -0.116 | -1.017 | -0.91 | -0.716 | 0.819 | 1.015 | 1.007 |
| 11 | -0.62 | -0.364 | -0.12 | -1.122 | 0.221 | 0.279 | -0.941 | 0.164 | -0.077 | 0.31 | 0.196 | -0.298 | -0.417 | 0.657 | 0.101 | 0.389 |
| 12 | -0.752 | 0.402 | 0.155 | -1.442 | -0.345 | 1.218 | -1.07 | -0.132 | -1.223 | 1.013 | -1.595 | -1.053 | -0.929 | 0.739 | 0.093 | -2.001 |
| 13 | -0.401 | -0.41 | -0.909 | -2.022 | 1.21 | 1.319 | -2.253 | 0.926 | -0.522 | 0.175 | -0.822 | -0.532 | -2.652 | -0.633 | -0.512 | -0.927 |
| 14 | 0.115 | -2.243 | 0.956 | -0.154 | 1.218 | -1.543 | -0.509 | 0.657 | -1.094 | -3.153 | -0.31 | -0.831 | -0.823 | -1.46 | 0.841 | -0.431 |
| 15 | -1.175 | 0.004 | 1.185 | -0.368 | -1.757 | -1.461 | -4.4 | -1.724 | -1.259 | 0.926 | 0.827 | 0.149 | -1.982 | 0.278 | 0.464 | -0.194 |
| 16 | -1.475 | -0.79 | -1.754 | -3.05 | 0.396 | 1.02 | -2.286 | -0.326 | 0.217 | 1.411 | 0.214 | -0.551 | -1.717 | 0.458 | -0.226 | -1.215 |
| 17 | -0.515 | -0.37 | 0.168 | -0.407 | 0.55 | 0.768 | -1.111 | 1.546 | -1.519 | -0.146 | -1.24 | -0.062 | -1.915 | -1.248 | -0.66 | -0.369 |
| 18 | -0.733 | -1.606 | 0.416 | -0.695 | -0.307 | -0.082 | -0.159 | 0.397 | -1.181 | -0.773 | 0.181 | -1.046 | -2.591 | -0.154 | 1.557 | 0.272 |
| 19 | -1.026 | -2.62 | 0.027 | -1.965 | -0.786 | 0.138 | -1.619 | -0.448 | -0.33 | 1.035 | 1.087 | 0.594 | -2.24 | -0.425 | 0.821 | -0.481 |
| 20 | -1.782 | -0.506 | -0.23 | -2.615 | -0.085 | 0.507 | -1.263 | 0.603 | -0.299 | 1.045 | 0.63 | 0.0 | -1.174 | 0.101 | -0.125 | -0.096 |
| 21 | -0.303 | -0.732 | -0.567 | -1.044 | 0.169 | 0.701 | -2.221 | 1.067 | 0.066 | 0.296 | -0.146 | -0.58 | -1.461 | 0.567 | 0.111 | -0.362 |
| 22 | -0.555 | -0.08 | 0.306 | -0.999 | 0.394 | 0.719 | -1.351 | 0.594 | -0.39 | -0.193 | -0.567 | -0.53 | -1.167 | 0.062 | 0.729 | 0.065 |