Model info
| Transcription factor | Klf4 | ||||||||
| Model | KLF4_MOUSE.H10DI.C | ||||||||
| Model type | Dinucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 22 | ||||||||
| Quality | C | ||||||||
| Consensus | nvnnvvndGGGYGKGGYbbnvn | ||||||||
| wAUC | 0.9287471424912743 | ||||||||
| Best AUC | 0.9287471424912743 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 520 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors{2.3.1} | ||||||||
| TF subfamily | Krüppel-like factors{2.3.1.2} | ||||||||
| MGI | 1342287 | ||||||||
| EntrezGene | 16600 | ||||||||
| UniProt ID | KLF4_MOUSE | ||||||||
| UniProt AC | Q60793 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | 20.424 | 8.554 | 55.099 | 30.032 | 34.626 | 45.934 | 29.804 | 20.35 | 45.121 | 26.214 | 72.029 | 23.731 | 8.543 | 14.287 | 57.257 | 6.91 |
| 02 | 20.974 | 14.573 | 56.388 | 16.778 | 24.578 | 20.197 | 23.09 | 27.124 | 46.842 | 52.034 | 93.252 | 22.061 | 2.846 | 21.34 | 23.387 | 33.45 |
| 03 | 18.893 | 14.596 | 50.759 | 10.991 | 33.088 | 23.755 | 25.922 | 25.378 | 54.456 | 45.701 | 61.673 | 34.288 | 31.68 | 13.955 | 33.627 | 20.152 |
| 04 | 39.324 | 37.511 | 54.163 | 7.118 | 26.802 | 20.332 | 35.289 | 15.584 | 25.006 | 57.23 | 67.145 | 22.599 | 15.913 | 18.132 | 43.069 | 13.696 |
| 05 | 18.4 | 13.713 | 63.928 | 11.005 | 23.012 | 54.119 | 30.169 | 25.905 | 37.179 | 43.07 | 94.103 | 25.315 | 11.243 | 12.628 | 22.46 | 12.666 |
| 06 | 16.587 | 27.746 | 39.456 | 6.047 | 26.611 | 45.779 | 9.124 | 42.015 | 60.772 | 70.953 | 58.674 | 20.26 | 9.194 | 20.509 | 30.106 | 15.081 |
| 07 | 43.186 | 1.96 | 39.691 | 28.326 | 52.01 | 2.02 | 14.529 | 96.429 | 58.993 | 1.826 | 21.001 | 55.539 | 33.949 | 2.116 | 20.059 | 27.28 |
| 08 | 0.0 | 0.0 | 188.139 | 0.0 | 0.924 | 0.0 | 6.998 | 0.0 | 1.113 | 1.004 | 93.163 | 0.0 | 0.898 | 0.0 | 206.676 | 0.0 |
| 09 | 0.0 | 0.0 | 2.936 | 0.0 | 0.0 | 0.0 | 1.004 | 0.0 | 0.0 | 1.013 | 493.962 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| 10 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.013 | 0.0 | 0.918 | 0.0 | 495.916 | 1.068 | 0.0 | 0.0 | 0.0 | 0.0 |
| 11 | 0.0 | 0.0 | 0.0 | 0.918 | 0.0 | 0.0 | 0.0 | 0.0 | 13.025 | 221.198 | 0.0 | 262.705 | 0.0 | 0.0 | 0.0 | 1.068 |
| 12 | 0.0 | 0.0 | 13.025 | 0.0 | 1.046 | 0.0 | 220.152 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 263.533 | 1.159 |
| 13 | 0.0 | 0.0 | 1.046 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.028 | 6.184 | 236.653 | 251.844 | 0.0 | 0.0 | 0.0 | 1.159 |
| 14 | 0.0 | 0.99 | 1.038 | 0.0 | 0.0 | 1.072 | 5.113 | 0.0 | 52.907 | 10.603 | 161.05 | 13.14 | 3.876 | 1.896 | 234.531 | 12.7 |
| 15 | 2.946 | 1.958 | 51.879 | 0.0 | 0.0 | 3.349 | 11.211 | 0.0 | 8.975 | 8.903 | 355.123 | 28.731 | 0.0 | 0.985 | 23.004 | 1.85 |
| 16 | 0.905 | 11.016 | 0.0 | 0.0 | 1.054 | 10.959 | 0.0 | 3.183 | 17.145 | 261.066 | 34.324 | 128.682 | 0.0 | 24.729 | 3.01 | 2.843 |
| 17 | 2.0 | 7.911 | 7.154 | 2.039 | 38.526 | 153.696 | 25.421 | 90.126 | 5.786 | 19.305 | 6.167 | 6.076 | 2.93 | 64.49 | 44.044 | 23.244 |
| 18 | 5.85 | 8.704 | 27.041 | 7.646 | 31.024 | 95.722 | 50.91 | 67.747 | 13.042 | 18.902 | 41.004 | 9.838 | 10.81 | 38.921 | 49.883 | 21.871 |
| 19 | 10.943 | 12.891 | 30.958 | 5.934 | 40.874 | 50.355 | 29.195 | 41.826 | 21.545 | 51.738 | 57.022 | 38.533 | 9.856 | 23.812 | 35.041 | 38.393 |
| 20 | 13.957 | 19.248 | 36.842 | 13.171 | 38.097 | 43.662 | 19.109 | 37.927 | 30.94 | 47.376 | 54.969 | 18.932 | 5.668 | 60.715 | 50.278 | 8.024 |
| 21 | 16.946 | 24.331 | 31.784 | 15.6 | 50.378 | 57.707 | 16.781 | 46.135 | 32.355 | 52.911 | 51.886 | 24.046 | 5.933 | 23.593 | 36.634 | 11.893 |
PWM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | -0.417 | -1.261 | 0.564 | -0.037 | 0.104 | 0.383 | -0.045 | -0.42 | 0.366 | -0.171 | 0.83 | -0.269 | -1.263 | -0.766 | 0.602 | -1.465 |
| 02 | -0.391 | -0.747 | 0.587 | -0.609 | -0.235 | -0.428 | -0.296 | -0.138 | 0.403 | 0.507 | 1.087 | -0.341 | -2.278 | -0.374 | -0.284 | 0.069 |
| 03 | -0.493 | -0.745 | 0.482 | -1.02 | 0.059 | -0.268 | -0.182 | -0.203 | 0.552 | 0.378 | 0.676 | 0.094 | 0.016 | -0.789 | 0.075 | -0.43 |
| 04 | 0.229 | 0.183 | 0.547 | -1.436 | -0.149 | -0.421 | 0.122 | -0.681 | -0.218 | 0.602 | 0.76 | -0.317 | -0.661 | -0.533 | 0.32 | -0.807 |
| 05 | -0.519 | -0.806 | 0.712 | -1.019 | -0.299 | 0.546 | -0.033 | -0.183 | 0.174 | 0.32 | 1.096 | -0.206 | -0.998 | -0.886 | -0.323 | -0.883 |
| 06 | -0.62 | -0.115 | 0.233 | -1.59 | -0.156 | 0.38 | -1.2 | 0.295 | 0.661 | 0.815 | 0.626 | -0.425 | -1.192 | -0.413 | -0.035 | -0.713 |
| 07 | 0.322 | -2.598 | 0.239 | -0.095 | 0.507 | -2.573 | -0.75 | 1.121 | 0.632 | -2.657 | -0.389 | 0.572 | 0.084 | -2.534 | -0.434 | -0.132 |
| 08 | -4.398 | -4.398 | 1.787 | -4.398 | -3.18 | -4.398 | -1.453 | -4.398 | -3.046 | -3.121 | 1.086 | -4.398 | -3.201 | -4.398 | 1.881 | -4.398 |
| 09 | -4.398 | -4.398 | -2.251 | -4.398 | -4.398 | -4.398 | -3.121 | -4.398 | -4.398 | -3.115 | 2.751 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 |
| 10 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -3.115 | -4.398 | -3.185 | -4.398 | 2.755 | -3.076 | -4.398 | -4.398 | -4.398 | -4.398 |
| 11 | -4.398 | -4.398 | -4.398 | -3.185 | -4.398 | -4.398 | -4.398 | -4.398 | -0.856 | 1.949 | -4.398 | 2.12 | -4.398 | -4.398 | -4.398 | -3.076 |
| 12 | -4.398 | -4.398 | -0.856 | -4.398 | -3.092 | -4.398 | 1.944 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | 2.123 | -3.016 |
| 13 | -4.398 | -4.398 | -3.092 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -2.57 | -1.569 | 2.016 | 2.078 | -4.398 | -4.398 | -4.398 | -3.016 |
| 14 | -4.398 | -3.131 | -3.097 | -4.398 | -4.398 | -3.074 | -1.747 | -4.398 | 0.524 | -1.055 | 1.632 | -0.847 | -2.002 | -2.626 | 2.007 | -0.88 |
| 15 | -2.248 | -2.599 | 0.504 | -4.398 | -4.398 | -2.134 | -1.001 | -4.398 | -1.215 | -1.223 | 2.421 | -0.081 | -4.398 | -3.135 | -0.3 | -2.646 |
| 16 | -3.195 | -1.018 | -4.398 | -4.398 | -3.086 | -1.023 | -4.398 | -2.179 | -0.588 | 2.114 | 0.095 | 1.408 | -4.398 | -0.229 | -2.229 | -2.279 |
| 17 | -2.582 | -1.336 | -1.432 | -2.566 | 0.209 | 1.585 | -0.201 | 1.053 | -1.632 | -0.472 | -1.572 | -1.586 | -2.253 | 0.72 | 0.342 | -0.29 |
| 18 | -1.621 | -1.245 | -0.141 | -1.369 | -0.005 | 1.113 | 0.485 | 0.769 | -0.855 | -0.493 | 0.271 | -1.127 | -1.036 | 0.219 | 0.465 | -0.349 |
| 19 | -1.025 | -0.866 | -0.007 | -1.608 | 0.268 | 0.475 | -0.065 | 0.291 | -0.364 | 0.501 | 0.598 | 0.209 | -1.126 | -0.266 | 0.115 | 0.206 |
| 20 | -0.789 | -0.475 | 0.165 | -0.845 | 0.198 | 0.333 | -0.482 | 0.194 | -0.008 | 0.414 | 0.562 | -0.491 | -1.651 | 0.66 | 0.473 | -1.323 |
| 21 | -0.6 | -0.245 | 0.019 | -0.68 | 0.475 | 0.61 | -0.609 | 0.388 | 0.036 | 0.524 | 0.504 | -0.256 | -1.608 | -0.275 | 0.159 | -0.944 |